A medicinal chemist's guide to molecular interactions

C Bissantz, B Kuhn, M Stahl - Journal of medicinal chemistry, 2010 - ACS Publications
Molecular recognition in biological systems relies on the existence of specific attractive
interactions between two partner molecules. Structure-based drug design seeks to identify …

Prediction of intestinal permeability

WJ Egan, G Lauri - Advanced drug delivery reviews, 2002 - Elsevier
This review focuses on computational methods for the prediction of passive intestinal
permeability. Existing computational models are surveyed and assessed in terms of …

The pKBHX Database: Toward a Better Understanding of Hydrogen-Bond Basicity for Medicinal Chemists

C Laurence, KA Brameld, J Graton… - Journal of medicinal …, 2009 - ACS Publications
The hydrogen bond (HBa) is one of the fundamental noncovalent interactions between a
drug molecule and its local environment. For drug molecules, this local environment may be …

Bioisosteric replacement and scaffold hopping in lead generation and optimization

SR Langdon, P Ertl, N Brown - Molecular informatics, 2010 - Wiley Online Library
Bioisosteric replacement and scaffold hopping are twin methods used in drug design to
improve the synthetic accessibility, potency and drug like properties of a compound and to …

Fast calculation of hydrogen-bond strengths and free energy of hydration of small molecules

GM Ghiandoni, E Caldeweyher - Scientific Reports, 2023 - nature.com
Hydrogen bonding is an interaction of great importance in drug discovery and development
as it may significantly affect chemical and biological processes including the interaction of …

[HTML][HTML] How hydrogen bonds impact P-glycoprotein transport and permeability

PV Desai, TJ Raub, MJ Blanco - Bioorganic & medicinal chemistry letters, 2012 - Elsevier
The requirement to cross a biological membrane can be a complex process especially if
multidrug transporters such as P-gp must be considered. Drug partitioning into the lipid …

Empirical Hydrogen Bonding Donor (HBD) Parameters of Organic Solvents Using Solvatochromic Probes–A Critical Evaluation

S Spange, N Weiß - ChemPhysChem, 2023 - Wiley Online Library
The solvatochromicity of established solvatochromic UV/Vis probes, which appear to be
sensitive to the so‐called hydrogen bond donor (HBD) property of the solvent, is analysed …

[PDF][PDF] It is important to compute intramolecular hydrogen bonding in drug design

MJR Yunta - Am. J. Model. Optim, 2017 - researchgate.net
The effect of weak intermolecular interactions on the binding affinity between ligand-protein
complexes plays an important role in stabilizing a ligand at the interface of a protein …

Antiretroviral effect simulation from black tea (Camellia sinensis) via dual inhibitors mechanism in HIV-1 and its social perspective in Indonesia

VD Kharisma, SD Kharisma, ANM Ansori… - Research Journal of …, 2021 - indianjournals.com
This study aims to investigate the general social perspective related to black tea (Camellia
sinensis) as a traditional treatment in Indonesia, the potency of bioactive compounds in …

[HTML][HTML] Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach

SS Ahmed, MO Rahman, AS Alqahtani, N Sultana… - Toxicology Reports, 2023 - Elsevier
In recent years, small molecule inhibition of LDHA (Lactate Dehydrogenase A) has evolved
as an appealing option for anticancer therapy. LDHA catalyzes the interconversion of …