Applications of western blot technique: From bench to bedside

GH Meftahi, Z Bahari… - Biochemistry and …, 2021 - Wiley Online Library
Western blot (WB) or immunoblot is a workhorse method. It is commonly used by biologists
for study of different aspects of protein biomolecules. In addition, it has been widely used in …

Tools for visually exploring biological networks

M Suderman, M Hallett - Bioinformatics, 2007 - academic.oup.com
Many tools exist for visually exploring biological networks including well-known examples
such as Cytoscape, VisANT, Pathway Studio and Patika. These systems play a key role in …

YLoc—an interpretable web server for predicting subcellular localization

S Briesemeister, J Rahnenfï¿ ½hrer… - Nucleic acids …, 2010 - academic.oup.com
Predicting subcellular localization has become a valuable alternative to time-consuming
experimental methods. Major drawbacks of many of these predictors is their lack of …

Going from where to why—interpretable prediction of protein subcellular localization

S Briesemeister, J Rahnenführer, O Kohlbacher - Bioinformatics, 2010 - academic.oup.com
Motivation: Protein subcellular localization is pivotal in understanding a protein's function.
Computational prediction of subcellular localization has become a viable alternative to …

SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins

S Briesemeister, T Blum, S Brady, Y Lam… - Journal of proteome …, 2009 - ACS Publications
SherLoc2 is a comprehensive high-accuracy subcellular localization prediction system. It is
applicable to animal, fungal, and plant proteins and covers all main eukaryotic subcellular …

Integrated bioinformatics-based subtractive genomics approach to decipher the therapeutic drug target and its possible intervention against brucellosis

K Khan, MSO Alhar, MN Abbas, SQ Abbas, M Kazi… - Bioengineering, 2022 - mdpi.com
Brucella suis, one of the causative agents of brucellosis, is Gram-negative intracellular
bacteria that may be found all over the globe and it is a significant facultative zoonotic …

Proteome analysis of microdissected formalin-fixed and paraffin-embedded tissue specimens

T Guo, W Wang, PA Rudnick, T Song… - … of Histochemistry & …, 2007 - journals.sagepub.com
Targeted proteomics research, based on the enrichment of disease-relevant proteins from
isolated cell populations selected from high-quality tissue specimens, offers great potential …

Extracellular matrix imaging of breast tissue pathologies by MALDI–imaging mass spectrometry

PM Angel, K Schwamborn… - PROTEOMICS …, 2019 - Wiley Online Library
Purpose A new method accessing proteins from extracellular matrix by imaging mass
spectrometry (ECM IMS) has been recently reported. ECM IMS is evaluated for use in …

Genome-wide analysis of serine carboxypeptidase-like acyltransferase gene family for evolution and characterization of enzymes involved in the biosynthesis of …

MZ Ahmad, P Li, G She, E Xia, VA Benedito… - Frontiers in plant …, 2020 - frontiersin.org
Tea (Camellia sinensis L.) leaves synthesize and concentrate a vast array of galloylated
catechins (eg, EGCG and ECG) and non-galloylated catechins (eg, EGC, catechin, and …

Identifying essential proteins based on sub-network partition and prioritization by integrating subcellular localization information

M Li, W Li, FX Wu, Y Pan, J Wang - Journal of theoretical biology, 2018 - Elsevier
Essential proteins are important participants in various life activities and play a vital role in
the survival and reproduction of living organisms. Identification of essential proteins from …