Capturing single‐copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in …

BB Liu, ZY Ma, C Ren, RGJ Hodel… - … of Systematics and …, 2021 - Wiley Online Library
With the decreasing cost and availability of many newly developed bioinformatics pipelines,
next‐generation sequencing (NGS) has revolutionized plant systematics in recent years …

Lineage‐specific vs. universal: A comparison of the Compositae1061 and Angiosperms353 enrichment panels in the sunflower family

CM Siniscalchi, O Hidalgo, L Palazzesi… - Applications in Plant …, 2021 - Wiley Online Library
Premise Phylogenetic studies in the Compositae are challenging due to the sheer size of the
family and the challenges they pose for molecular tools, ranging from the genomic impact of …

Phylogenomics of the hyperdiverse daisy tribes: Anthemideae, Astereae, Calenduleae, Gnaphalieae, and Senecioneae

LE Watson, CM Siniscalchi… - Journal of Systematics …, 2020 - Wiley Online Library
Asteraceae account for 10% of all flowering plant species, and 35%–40% of these are in five
closely related tribes that total over 10 000 species. These tribes include Anthemideae …

Edaphic specialization onto bare, rocky outcrops as a factor in the evolution of desert angiosperms

IH Lichter-Marck, BG Baldwin - Proceedings of the National …, 2023 - National Acad Sciences
Understanding the processes that enable organisms to shift into more arid environments as
they emerge is critical for gauging resilience to climate change, yet these forces remain …

[HTML][HTML] Phylogenomics and morphology of Celmisiinae (Asteraceae: Astereae): Taxonomic and evolutionary implications

DA Nicol, P Saldivia, TC Summerfield, M Heads… - Molecular Phylogenetics …, 2024 - Elsevier
Abstract The tribe Astereae (Asteraceae) includes 36 subtribes and 252 genera, and is
distributed worldwide in temperate and tropical regions. One of the subtribes, Celmisiinae …

Phylogenetic relationships, hybridization events, and drivers of diversification of East Asian wild grapes as revealed by phylogenomic analyses

ZY Ma, ZL Nie, XQ Liu, JP Tian, YF Zhou… - … of Systematics and …, 2023 - Wiley Online Library
East Asian wild grapes show a high level of species diversity and have been widely
recognized as important germplasm resources of wine, table grapes, and resistance to biotic …

Compositae‐ParaLoss‐1272: A complementary sunflower‐specific probe set reduces paralogs in phylogenomic analyses of complex systems

ER Moore‐Pollard, DS Jones… - Applications in Plant …, 2024 - Wiley Online Library
Premise A family‐specific probe set for sunflowers, Compositae‐1061, enables family‐wide
phylogenomic studies and investigations at lower taxonomic levels, but may lack resolution …

New insights into the relationships within subtribe Scorzonerinae (Cichorieae, Asteraceae) using hybrid capture phylogenomics (Hyb-Seq)

E Hatami, KE Jones, N Kilian - Frontiers in Plant Science, 2022 - frontiersin.org
Subtribe Scorzonerinae (Cichorieae, Asteraceae) contains 12 main lineages and
approximately 300 species. Relationships within the subtribe, either at inter-or intrageneric …

A phylogenetically informed reclassification of the rock daisies (Perityleae; Compositae)

IH Lichter-Marck, BG Baldwin - Systematic Botany, 2022 - ingentaconnect.com
Recent phylogenomic analyses of sequence data from chloroplast and nuclear genomes as
well as morphological and cytological analyses resolved long standing phylogenetic …

[HTML][HTML]  Generic concepts and species diversity within the Gynoxyoid clade (Senecioneae, Compositae)

B Escobari, T Borsch, N Kilian - PhytoKeys, 2023 - ncbi.nlm.nih.gov
 Abstract The Gynoxyoid clade of the Senecioneae (Asteraceae) until now included the five
genera Aequatorium, Gynoxys, Nordenstamia, Paracalia and Paragynoxys as diagnosed …