Coupling mRNA processing with transcription in time and space

DL Bentley - Nature Reviews Genetics, 2014 - nature.com
Maturation of mRNA precursors often occurs simultaneously with their synthesis by RNA
polymerase II (Pol II). The co-transcriptional nature of mRNA processing has permitted the …

The RNA polymerase II CTD coordinates transcription and RNA processing

JP Hsin, JL Manley - Genes & development, 2012 - genesdev.cshlp.org
The C-terminal domain (CTD) of the RNA polymerase II largest subunit consists of multiple
heptad repeats (consensus Tyr1–Ser2–Pro3–Thr4–Ser5–Pro6–Ser7), varying in number …

Elongation by RNA polymerase II: the short and long of it

RJ Sims, R Belotserkovskaya… - Genes & …, 2004 - genesdev.cshlp.org
Appreciable advances into the process of transcript elongation by RNA polymerase II (RNAP
II) have identified this stage as a dynamic and highly regulated step of the transcription …

Transcription termination by nuclear RNA polymerases

P Richard, JL Manley - Genes & development, 2009 - genesdev.cshlp.org
Gene transcription in the cell nucleus is a complex and highly regulated process.
Transcription in eukaryotes requires three distinct RNA polymerases, each of which employs …

Protein factors in pre-mRNA 3′-end processing

CR Mandel, Y Bai, L Tong - Cellular and Molecular Life Sciences, 2008 - Springer
Most eukaryotic mRNA precursors (premRNAs) must undergo extensive processing,
including cleavage and polyadenylation at the 3′-end. Processing at the 3′-end is …

The transcription cycle in eukaryotes: from productive initiation to RNA polymerase II recycling

J Shandilya, SGE Roberts - Biochimica et Biophysica Acta (BBA)-Gene …, 2012 - Elsevier
The cycle of eukaryotic transcription, from initiation to elongation and termination is
regulated at multiple steps. Coordinated action of regulatory factors keeps in check the …

[HTML][HTML] Biased alternative polyadenylation in human tissues

H Zhang, JY Lee, B Tian - Genome biology, 2005 - Springer
Background Alternative polyadenylation is one of the mechanisms in human cells that give
rise to a variety of transcripts from a single gene. More than half of the human genes have …

Gene loops juxtapose promoters and terminators in yeast

JM O'Sullivan, SM Tan-Wong, A Morillon, B Lee… - Nature …, 2004 - nature.com
Mechanistic analysis of transcriptional initiation and termination by RNA polymerase II (PolII)
indicates that some factors are common to both processes,. Here we show that two long …

New perspectives on connecting messenger RNA 3′ end formation to transcription

N Proudfoot - Current opinion in cell biology, 2004 - Elsevier
Recent advances in understanding the molecular mechanism of mRNA 3′ end cleavage
and polyadenylation have uncovered an unanticipated involvement of this process in the …

[HTML][HTML] Ssu72 Is an RNA polymerase II CTD phosphatase

S Krishnamurthy, X He, M Reyes-Reyes, C Moore… - Molecular cell, 2004 - cell.com
Abstract Phosphorylation of serine-2 (S2) and serine-5 (S5) of the C-terminal domain (CTD)
of RNA polymerase II (RNAP II) is a dynamic process that regulates the transcription cycle …