The ubiquitin code

D Komander, M Rape - Annual review of biochemistry, 2012 - annualreviews.org
The posttranslational modification with ubiquitin, a process referred to as ubiquitylation,
controls almost every process in cells. Ubiquitin can be attached to substrate proteins as a …

Regulation of DNA double-strand break repair by ubiquitin and ubiquitin-like modifiers

P Schwertman, S Bekker-Jensen… - Nature reviews Molecular …, 2016 - nature.com
DNA double-strand breaks (DSBs) are highly cytotoxic DNA lesions. The swift recognition
and faithful repair of such damage is crucial for the maintenance of genomic stability, as well …

JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications

V Kasinath, C Beck, P Sauer, S Poepsel, J Kosmatka… - Science, 2021 - science.org
INTRODUCTION Histone modification activity of the polycomb repressive complexes 1 and
2 (PRC1 and PRC2) is critical for the establishment and maintenance of gene expression …

Ubiquitin-binding proteins: decoders of ubiquitin-mediated cellular functions

K Husnjak, I Dikic - Annual review of biochemistry, 2012 - annualreviews.org
Ubiquitin acts as a versatile cellular signal that controls a wide range of biological processes
including protein degradation, DNA repair, endocytosis, autophagy, transcription, immunity …

The emerging complexity of protein ubiquitination

D Komander - Biochemical society transactions, 2009 - portlandpress.com
Protein ubiquitination and protein phosphorylation are two fundamental regulatory post-
translational modifications controlling intracellular signalling events. However, the ubiquitin …

Ubiquitin-binding domains—from structures to functions

I Dikic, S Wakatsuki, KJ Walters - Nature reviews Molecular cell biology, 2009 - nature.com
Ubiquitin-binding domains (UBDs) are modular elements that bind non-covalently to the
protein modifier ubiquitin. Recent atomic-level resolution structures of ubiquitin–UBD …

Dynamics of DNA damage response proteins at DNA breaks: a focus on protein modifications

SE Polo, SP Jackson - Genes & development, 2011 - genesdev.cshlp.org
Genome integrity is constantly monitored by sophisticated cellular networks, collectively
termed the DNA damage response (DDR). A common feature of DDR proteins is their …

BARD1 reads H2A lysine 15 ubiquitination to direct homologous recombination

JR Becker, G Clifford, C Bonnet, A Groth, MD Wilson… - Nature, 2021 - nature.com
Protein ubiquitination at sites of DNA double-strand breaks (DSBs) by RNF168 recruits
BRCA1 and 53BP1,, which are mediators of the homologous recombination and non …

Phosphorylation and linear ubiquitin direct A20 inhibition of inflammation

IE Wertz, K Newton, D Seshasayee, S Kusam, C Lam… - Nature, 2015 - nature.com
Inactivation of the TNFAIP3 gene, encoding the A20 protein, is associated with critical
inflammatory diseases including multiple sclerosis, rheumatoid arthritis and Crohn's …

Recognition, signaling, and repair of DNA double-strand breaks produced by ionizing radiation in mammalian cells: the molecular choreography

LH Thompson - Mutation Research/Reviews in Mutation Research, 2012 - Elsevier
The faithful maintenance of chromosome continuity in human cells during DNA replication
and repair is critical for preventing the conversion of normal diploid cells to an oncogenic …