Supernatural: Artificial Nucleobases and Backbones to Program Hybridization-Based Assemblies and Circuits

M Lopez-Tena, SK Chen, N Winssinger - Bioconjugate Chemistry, 2022 - ACS Publications
The specificity and predictability of hybridization make oligonucleotides a powerful platform
to program assemblies and networks with logic-gated responses, an area of research which …

A–T base pairs are more stable than G–C base pairs in a hydrated ionic liquid

H Tateishi‐Karimata, N Sugimoto - Angewandte Chemie, 2012 - infona.pl
Ein „grünes “Lösungsmittel: Quantitative thermodynamische Analysen zeigten, dass in der
hydratisierten ionischen Flüssigkeit (IL) Cholindihydrogenphosphat A‐T‐Basenpaare …

Characterization of DNA with an 8-oxoguanine modification

SK Singh, MW Szulik, M Ganguly… - Nucleic acids …, 2011 - academic.oup.com
The oxidation of DNA resulting from reactive oxygen species generated during aerobic
respiration is a major cause of genetic damage that, if not repaired, can lead to mutations …

Watson–Crick Base Pairs with Protecting Groups: The 2-Amino Groups of Purine-and 7-Deazapurine-2, 6-Diamine as Target Sites for DNA Functionalization by …

D Kondhare, X Heddinga, P Leonard… - Bioconjugate …, 2023 - ACS Publications
The recognition of Watson–Crick base pairs carrying nucleobase protecting groups is
reported as a new approach for DNA functionalization. The 2-amino groups of purine-and 7 …

Elucidating the Role of Groove Hydration on Stability and Functions of Biased DNA Duplexes in Cell-Like Chemical Environments

S Ghosh, S Takahashi, T Ohyama, L Liu… - Journal of the …, 2024 - ACS Publications
Hydration plays a key role in the structure-specific stabilization of biomolecules such as
nucleic acids. The hydration patterns of biased DNA sequences in the genome, such as GC …

Impact of 3-deazapurine nucleobases on RNA properties

R Bereiter, M Himmelstoß, E Renard… - Nucleic Acids …, 2021 - academic.oup.com
Deazapurine nucleosides such as 3-deazaadenosine (c3A) are crucial for atomic
mutagenesis studies of functional RNAs. They were the key for our current mechanistic …

[图书][B] Organophosphorus Chemistry: Volume 35

CD Hall, N Bricklebank, J Van De Grampel, M Migaud… - 2006 - books.google.com
Organophosphorus Chemistry provides a comprehensive annual review of the literature.
Coverage includes phosphines and their chalcogenides, phosphonium salts, low …

Applicability of the nearest-neighbour model for pseudoknot RNAs

S Satpathi, T Endoh, N Sugimoto - Chemical Communications, 2022 - pubs.rsc.org
The validity of the nearest-neighbour (NN) model was verified in an RNA pseudoknot (PK)
structure. The thermodynamic parameters of the second hairpin stem (S2) region, which …

Ionization Patterns and Chemical Reactivity of Cytosine‐Guanine Watson‐Crick Pairs

IA Uddin, E Stec, GA Papadantonakis - ChemPhysChem, 2024 - Wiley Online Library
Gas‐phase and aqueous vertical ionization potentials, vIPgas and vIPaq respectively and
measurements of the molecular electrostatic and local ionization maps calculated at the …

Synthesis and characterization of PNA oligomers containing preQ1 as a positively charged guanine analogue

S Moriya, H Shibasaki, M Kohara, K Kuwata… - Bioorganic & Medicinal …, 2021 - Elsevier
We report the synthesis of a peptide nucleic acid (PNA) monomer containing preQ 1, a
positively charged guanine analogue. The new monomer was incorporated into PNA …