The incomplete natural history of mitochondria

JWO Ballard, MC Whitlock - Molecular ecology, 2004 - Wiley Online Library
Mitochondrial DNA (mtDNA) has been used to study molecular ecology and
phylogeography for 25 years. Much important information has been gained in this way, but it …

Statistical methods for detecting molecular adaptation

Z Yang, JP Bielawski - Trends in ecology & evolution, 2000 - cell.com
The past few years have seen the development of powerful statistical methods for detecting
adaptive molecular evolution. These methods compare synonymous and nonsynonymous …

[图书][B] Modern phylogenetic comparative methods and their application in evolutionary biology: concepts and practice

LZ Garamszegi - 2014 - Springer
Many evolutionary biologists are concerned with the tremendous amount of diversity of
species, and their phenotypes, that we can currently observe in nature, and one of the most …

[引用][C] Phylogeography: The History and Formation of Species

JC Avise - 2000 - books.google.com
Phylogeography is a discipline concerned with various relationships between gene
genealogies—phylogenetics—and geography. The word “phylogeography” was coined in …

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

Z Yang, R Nielsen - Molecular biology and evolution, 2000 - academic.oup.com
Approximate methods for estimating the numbers of synonymous and nonsynonymous
substitutions between two DNA sequences involve three steps: counting of synonymous and …

Initial sequence of the chimpanzee genome and comparison with the human genome

… Sequencing and Analysis Consortium Waterson Robert … - Nature, 2005 - nature.com
Here we present a draft genome sequence of the common chimpanzee (Pan troglodytes).
Through comparison with the human genome, we have generated a largely complete …

[图书][B] Computational molecular evolution

Z Yang - 2006 - books.google.com
The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …

Robustness and evolvability in living systems

A Wagner - 2013 - torrossa.com
Living things are unimaginably complex, yet they have withstood a withering assault of
harmful influences over several billion years. These influences include cataclysmic changes …

[图书][B] Molecular evolution: a phylogenetic approach

RDM Page, EC Holmes - 2009 - books.google.com
The study of evolution at the molecular level has given the subject of evolutionary biology a
new significance. Phylogenetic'trees' of gene sequences are a powerful tool for recovering …

Incorporating molecular evolution into phylogenetic analysis, and a new compilation of conserved polymerase chain reaction primers for animal mitochondrial DNA

C Simon, TR Buckley, F Frati, JB Stewart… - Annu. Rev. Ecol …, 2006 - annualreviews.org
DNA data has been widely used in animal phylogenetic studies over the past 15 years. Here
we review how these studies have used advances in knowledge of molecular evolutionary …