Machine learning for medical imaging: methodological failures and recommendations for the future

G Varoquaux, V Cheplygina - NPJ digital medicine, 2022 - nature.com
Research in computer analysis of medical images bears many promises to improve patients'
health. However, a number of systematic challenges are slowing down the progress of the …

[HTML][HTML] Surgical data science–from concepts toward clinical translation

L Maier-Hein, M Eisenmann, D Sarikaya, K März… - Medical image …, 2022 - Elsevier
Recent developments in data science in general and machine learning in particular have
transformed the way experts envision the future of surgery. Surgical Data Science (SDS) is a …

Swin-umamba: Mamba-based unet with imagenet-based pretraining

J Liu, H Yang, HY Zhou, Y Xi, L Yu, C Li… - … Conference on Medical …, 2024 - Springer
Accurate medical image segmentation demands the integration of multi-scale information,
spanning from local features to global dependencies. However, it is challenging for existing …

The medical segmentation decathlon

M Antonelli, A Reinke, S Bakas, K Farahani… - Nature …, 2022 - nature.com
International challenges have become the de facto standard for comparative assessment of
image analysis algorithms. Although segmentation is the most widely investigated medical …

Abdomenct-1k: Is abdominal organ segmentation a solved problem?

J Ma, Y Zhang, S Gu, C Zhu, C Ge… - … on Pattern Analysis …, 2021 - ieeexplore.ieee.org
With the unprecedented developments in deep learning, automatic segmentation of main
abdominal organs seems to be a solved problem as state-of-the-art (SOTA) methods have …

Learning calibrated medical image segmentation via multi-rater agreement modeling

W Ji, S Yu, J Wu, K Ma, C Bian, Q Bi… - Proceedings of the …, 2021 - openaccess.thecvf.com
In medical image analysis, it is typical to collect multiple annotations, each from a different
clinical expert or rater, in the expectation that possible diagnostic errors could be mitigated …

Common limitations of image processing metrics: A picture story

A Reinke, MD Tizabi, CH Sudre, M Eisenmann… - arXiv preprint arXiv …, 2021 - arxiv.org
While the importance of automatic image analysis is continuously increasing, recent meta-
research revealed major flaws with respect to algorithm validation. Performance metrics are …

Annotation-efficient deep learning for automatic medical image segmentation

S Wang, C Li, R Wang, Z Liu, M Wang, H Tan… - Nature …, 2021 - nature.com
Automatic medical image segmentation plays a critical role in scientific research and
medical care. Existing high-performance deep learning methods typically rely on large …

Radiogenomics: bridging imaging and genomics

Z Bodalal, S Trebeschi, TDL Nguyen-Kim, W Schats… - Abdominal …, 2019 - Springer
From diagnostics to prognosis to response prediction, new applications for radiomics are
rapidly being developed. One of the fastest evolving branches involves linking imaging …

Reproducibility of CT radiomic features within the same patient: influence of radiation dose and CT reconstruction settings

M Meyer, J Ronald, F Vernuccio, RC Nelson… - Radiology, 2019 - pubs.rsna.org
Background Results of recent phantom studies show that variation in CT acquisition
parameters and reconstruction techniques may make radiomic features largely …