[HTML][HTML] Intragenomic variation in nuclear ribosomal markers and its implication in species delimitation, identification and barcoding in fungi
Intragenomic variation is the molecular variation within the genome among repetitive DNA.
As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal …
As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal …
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
Next-generation sequencing applications for the study of fungal pathogens
S Jiang, Y Chen, S Han, L Lv, L Li - Microorganisms, 2022 - mdpi.com
Next-generation sequencing (NGS) has become a widely used technology in biological
research. NGS applications for clinical pathogen detection have become vital technologies …
research. NGS applications for clinical pathogen detection have become vital technologies …
Plague reservoir species throughout the world
A Mahmoudi, B Kryštufek, A Sludsky… - Integrative …, 2021 - Wiley Online Library
Plague has been known since ancient times as a re‐emerging infectious disease, causing
considerable socioeconomic burden in regional hotspots. To better understand the …
considerable socioeconomic burden in regional hotspots. To better understand the …
Targeted sequencing analysis pipeline for species identification of human pathogenic fungi using long-read nanopore sequencing
Among molecular-based techniques for fungal identification, Sanger sequencing of the
primary universal fungal DNA barcode, the internal transcribed spacer (ITS) region (ITS1 …
primary universal fungal DNA barcode, the internal transcribed spacer (ITS) region (ITS1 …
FoodOmics as a new frontier to reveal microbial community and metabolic processes occurring on table olives fermentation
A Vaccalluzzo, A Pino, N Russo, M De Angelis… - Food …, 2020 - Elsevier
Table olives are considered the most widespread fermented food in the Mediterranean area
and their consumption is expanding all over the world. This fermented vegetable can be …
and their consumption is expanding all over the world. This fermented vegetable can be …
Multi-omics and potential applications in wine production
Highlights•Current 'omics technologies are starting to be applied to wine microbiome
research.•However methods need refinement to account for the complexity of the wine …
research.•However methods need refinement to account for the complexity of the wine …
Population dynamics and yeast diversity in early winemaking stages without sulfites revealed by three complementary approaches
S Windholtz, L Dutilh, M Lucas, J Maupeu… - Applied sciences, 2021 - mdpi.com
Nowadays, the use of sulfur dioxide (SO2) during the winemaking process is a controversial
societal issue. In order to reduce its use, various alternatives are emerging, in particular …
societal issue. In order to reduce its use, various alternatives are emerging, in particular …
DNA barcoding of phytopathogens for disease diagnostics and bio-surveillance
P Choudhary, BN Singh, H Chakdar… - World Journal of …, 2021 - Springer
DNA barcoding has proven to be a versatile tool for plant disease diagnostics in the
genomics era. As the mass parallel and next generation sequencing techniques gained …
genomics era. As the mass parallel and next generation sequencing techniques gained …
Lost in translation: population genomics and long-read sequencing reveals relaxation of concerted evolution of the ribosomal DNA cistron
Concerted evolution of the ribosomal DNA array has been studied in numerous eukaryotic
taxa, yet is still poorly understood. rDNA genes are repeated dozens to hundreds of times in …
taxa, yet is still poorly understood. rDNA genes are repeated dozens to hundreds of times in …