[HTML][HTML] R loops: from physiological to pathological roles

T García-Muse, A Aguilera - Cell, 2019 - cell.com
DNA-RNA hybrids play a physiological role in cellular processes, but often, they represent
non-scheduled co-transcriptional structures with a negative impact on transcription …

R loops: new modulators of genome dynamics and function

JM Santos-Pereira, A Aguilera - Nature Reviews Genetics, 2015 - nature.com
R loops are nucleic acid structures composed of an RNA–DNA hybrid and a displaced
single-stranded DNA. Recently, evidence has emerged that R loops occur more often in the …

R-loop proximity proteomics identifies a role of DDX41 in transcription-associated genomic instability

T Mosler, F Conte, GMC Longo, I Mikicic… - Nature …, 2021 - nature.com
Transcription poses a threat to genomic stability through the formation of R-loops that can
obstruct progression of replication forks. R-loops are three-stranded nucleic acid structures …

R loops: from transcription byproducts to threats to genome stability

A Aguilera, T García-Muse - Molecular cell, 2012 - cell.com
RNA: DNA hybrid structures known as R loops were thought to be rare byproducts of
transcription. In the last decade, however, accumulating evidence has pointed to a new view …

Structural basis of R-loop recognition by the S9. 6 monoclonal antibody

C Bou-Nader, A Bothra, DN Garboczi… - Nature …, 2022 - nature.com
R-loops are ubiquitous, dynamic nucleic-acid structures that play fundamental roles in DNA
replication and repair, chromatin and transcription regulation, as well as telomere …

R-loop-mediated genomic instability is caused by impairment of replication fork progression

W Gan, Z Guan, J Liu, T Gui, K Shen… - Genes & …, 2011 - genesdev.cshlp.org
Transcriptional R loops are anomalous RNA: DNA hybrids that have been detected in
organisms from bacteria to humans. These structures have been shown in eukaryotes to …

RNA biogenesis and RNA metabolism factors as R-loop suppressors: a hidden role in genome integrity

R Luna, B Gómez-González… - Genes & …, 2024 - genesdev.cshlp.org
Genome integrity relies on the accuracy of DNA metabolism, but as appreciated for more
than four decades, transcription enhances mutation and recombination frequencies. More …

[HTML][HTML] Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells

R Chiarle, Y Zhang, RL Frock, SM Lewis, B Molinie… - Cell, 2011 - cell.com
Whereas chromosomal translocations are common pathogenetic events in cancer,
mechanisms that promote them are poorly understood. To elucidate translocation …

Genome instability: a mechanistic view of its causes and consequences

A Aguilera, B Gómez-González - Nature Reviews Genetics, 2008 - nature.com
Genomic instability in the form of mutations and chromosome rearrangements is usually
associated with pathological disorders, and yet it is also crucial for evolution. Two types of …

Replication of G quadruplex DNA

LK Lerner, JE Sale - Genes, 2019 - mdpi.com
A cursory look at any textbook image of DNA replication might suggest that the complex
machine that is the replisome runs smoothly along the chromosomal DNA. However, many …