High-throughput studies of biological systems are rapidly accumulating a wealth of'omics'-
scale data. Visualization is a key aspect of both the analysis and understanding of these …

Multivariate networks are made up of nodes and their relationships (links), but also data
about those nodes and links as attributes. Most real‐world networks are associated with …

Get an In-Depth Understanding of Graph Drawing Techniques, Algorithms, Software, and
Applications The Handbook of Graph Drawing and Visualization provides a broad, up-to …

Networks are typically visualized with force-based or spectral layouts. These algorithms lack
reproducibility and perceptual uniformity because they do not use a node coordinate system …

Many algorithms for graph layout have been devised over the last 30 years spanning both
the graph drawing and information visualisation communities. This article first reviews the …

Background Systems biology projects and omics technologies have led to a growing
number of biochemical pathway models and reconstructions. However, the majority of these …

With combined technological advancements in high-throughput next-generation sequencing
and deep mass spectrometry-based proteomics, proteogenomics, ie the integrative analysis …

Graph visualization is an important field in information visualization that is centered on the
graphical display of graph-structured data. Yet real world data is rarely just graph-structured …

Computational models are often employed in systems biology to study the dynamic
behaviours of complex systems. With the rise in the number of computational models, finding …

With the advent of modern omics technologies, it has become feasible to reconstruct (quasi-)
whole-cell metabolic networks and characterize them in more and more detail. Computer …