Incongruence in the phylogenomics era

JL Steenwyk, Y Li, X Zhou, XX Shen… - Nature Reviews Genetics, 2023 - nature.com
Genome-scale data and the development of novel statistical phylogenetic approaches have
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …

Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

Molecular mechanisms of adaptive evolution in wild animals and plants

Y Hu, X Wang, Y Xu, H Yang, Z Tong, R Tian… - Science China Life …, 2023 - Springer
Wild animals and plants have developed a variety of adaptive traits driven by adaptive
evolution, an important strategy for species survival and persistence. Uncovering the …

A plastid phylogenomic framework for the palm family (Arecaceae)

G Yao, YQ Zhang, C Barrett, B Xue, S Bellot, WJ Baker… - BMC biology, 2023 - Springer
Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …

Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sorting

H Song, Y Wang, H Shao, Z Li, P Hu… - Proceedings of the …, 2023 - National Acad Sciences
The almost simultaneous emergence of major animal phyla during the early Cambrian
shaped modern animal biodiversity. Reconstructing evolutionary relationships among such …

Dysfunction of duplicated pair rice histone acetyltransferases causes segregation distortion and an interspecific reproductive barrier

B Liao, YH Xiang, Y Li, KY Yang, JX Shan… - Nature …, 2024 - nature.com
Postzygotic reproductive isolation, which results in the irreversible divergence of species, is
commonly accompanied by hybrid sterility, necrosis/weakness, or lethality in the F1 or other …

The promise and pitfalls of synteny in phylogenomics

JL Steenwyk, N King - Plos Biology, 2024 - journals.plos.org
Reconstructing the tree of life remains a central goal in biology. Early methods, which relied
on small numbers of morphological or genetic characters, often yielded conflicting …

Taxonomic checklist of living American marsupials

D Astúa, JJ Cherem, P Teta - American and Australasian marsupials: an …, 2023 - Springer
An updated checklist for living American marsupial species (orders Didelphimorphia,
Microbiotheria, and Paucituberculata) is presented here. It includes 22 genera and 137 …

Widespread incomplete lineage sorting and introgression shaped adaptive radiation in the Gossypium genus

Y Xu, Y Wei, Z Zhou, X Cai, SA Boden, MJ Umer… - Plant …, 2024 - cell.com
Cotton (Gossypium) stands as a crucial economic crop, serving as the primary source of
natural fiber for the textile sector. However, the evolutionary mechanisms driving speciation …

Basal Anseriformes from the Early Paleogene of North America and Europe

P Houde, M Dickson, D Camarena - Diversity, 2023 - mdpi.com
We describe nearly complete skeletons of basal Anseriformes from the Latest Paleocene to
the early Eocene of North America and Europe. Collectively, these birds appear to be …