Overcoming endocrine resistance in breast cancer

AB Hanker, DR Sudhan, CL Arteaga - Cancer cell, 2020 - cell.com
Estrogen receptor-positive (ER+) breast cancer is the most common breast cancer subtype.
Treatment of ER+ breast cancer comprises interventions that suppress estrogen production …

The role of non-coding RNAs in oncology

FJ Slack, AM Chinnaiyan - Cell, 2019 - cell.com
For decades, research into cancer biology focused on the involvement of protein-coding
genes. Only recently was it discovered that an entire class of molecules, termed non-coding …

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

E Rheinbay, MM Nielsen, F Abascal, JA Wala… - Nature, 2020 - nature.com
The discovery of drivers of cancer has traditionally focused on protein-coding genes,,–. Here
we present analyses of driver point mutations and structural variants in non-coding regions …

The genomic landscape of endocrine-resistant advanced breast cancers

P Razavi, MT Chang, G Xu, C Bandlamudi, DS Ross… - Cancer cell, 2018 - cell.com
We integrated the genomic sequencing of 1,918 breast cancers, including 1,501 hormone
receptor-positive tumors, with detailed clinical information and treatment outcomes. In 692 …

Pan-cancer analysis of whole genomes

Nature, 2020 - nature.com
Cancer is driven by genetic change, and the advent of massively parallel sequencing has
enabled systematic documentation of this variation at the whole-genome scale,–. Here we …

Non-coding driver mutations in human cancer

K Elliott, E Larsson - Nature Reviews Cancer, 2021 - nature.com
Tumour formation involves random mutagenic events and positive evolutionary selection
acting on a subset of such events, referred to as driver mutations. A decade of careful …

Canonical and non-canonical WNT signaling in cancer stem cells and their niches: Cellular heterogeneity, omics reprogramming, targeted therapy and tumor plasticity

M Katoh - International journal of oncology, 2017 - spandidos-publications.com
Cancer stem cells (CSCs), which have the potential for self-renewal, differentiation and de-
differentiation, undergo epigenetic, epithelial-mesenchymal, immunological and metabolic …

Paraspeckles: where long noncoding RNA meets phase separation

AH Fox, S Nakagawa, T Hirose, CS Bond - Trends in biochemical sciences, 2018 - cell.com
Long noncoding RNA (lncRNA) molecules are some of the newest and least understood
players in gene regulation. Hence, we need good model systems with well-defined RNA and …

Whole genome sequencing analysis for cancer genomics and precision medicine

H Nakagawa, M Fujita - Cancer science, 2018 - Wiley Online Library
Explosive advances in next‐generation sequencer (NGS) and computational analyses have
enabled exploration of somatic protein‐altered mutations in most cancer types, with coding …

Passenger hotspot mutations in cancer driven by APOBEC3A and mesoscale genomic features

R Buisson, A Langenbucher, D Bowen, EE Kwan… - Science, 2019 - science.org
INTRODUCTION Extensive tumor sequencing efforts have transformed the way in which
cancer driver genes are identified. Appropriate statistical modeling is crucial for …