Diversity, ecology and evolution of Archaea

BJ Baker, V De Anda, KW Seitz, N Dombrowski… - Nature …, 2020 - nature.com
Compared to bacteria, our knowledge of archaeal biology is limited. Historically,
microbiologists have mostly relied on culturing and single-gene diversity surveys to …

The host-associated archaeome

G Borrel, JF Brugère, S Gribaldo, RA Schmitz… - Nature Reviews …, 2020 - nature.com
Host-associated microbial communities have an important role in shaping the health and
fitness of plants and animals. Most studies have focused on the bacterial, fungal or viral …

A genomic catalog of Earth's microbiomes

S Nayfach, S Roux, R Seshadri, D Udwary… - Nature …, 2021 - nature.com
The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has
enabled insights into the ecology and evolution of environmental and host-associated …

Non-syntrophic methanogenic hydrocarbon degradation by an archaeal species

Z Zhou, C Zhang, P Liu, L Fu, R Laso-Pérez, L Yang… - Nature, 2022 - nature.com
The methanogenic degradation of oil hydrocarbons can proceed through syntrophic
partnerships of hydrocarbon-degrading bacteria and methanogenic archaea,–. However …

Diversity and evolution of methane-related pathways in archaea

PS Garcia, S Gribaldo, G Borrel - Annual Review of Microbiology, 2022 - annualreviews.org
Methane is one of the most important greenhouse gases on Earth and holds an important
place in the global carbon cycle. Archaea are the only organisms that use methanogenesis …

Phylogenetically and catabolically diverse diazotrophs reside in deep-sea cold seep sediments

X Dong, C Zhang, Y Peng, HX Zhang, LD Shi… - Nature …, 2022 - nature.com
Microbially mediated nitrogen cycling in carbon-dominated cold seep environments remains
poorly understood. So far anaerobic methanotrophic archaea (ANME-2) and their sulfate …

[HTML][HTML] Extracellular cytochrome nanowires appear to be ubiquitous in prokaryotes

DP Baquero, V Cvirkaite-Krupovic, SS Hu, JL Fields… - Cell, 2023 - cell.com
Electrically conductive appendages from the anaerobic bacterium Geobacter
sulfurreducens, recently identified as extracellular cytochrome nanowires (ECNs), have …

A compendium of viruses from methanogenic archaea reveals their diversity and adaptations to the gut environment

S Medvedeva, G Borrel, M Krupovic, S Gribaldo - Nature Microbiology, 2023 - nature.com
Methanogenic archaea are major producers of methane, a potent greenhouse gas and
biofuel, and are widespread in diverse environments, including the animal gut. The …

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

GL Chadwick, CT Skennerton, R Laso-Pérez… - PLoS …, 2022 - journals.plos.org
The anaerobic oxidation of methane coupled to sulfate reduction is a microbially mediated
process requiring a syntrophic partnership between anaerobic methanotrophic (ANME) …

Factors shaping the abundance and diversity of the gut archaeome across the animal kingdom

CM Thomas, E Desmond-Le Quéméner… - Nature …, 2022 - nature.com
Archaea are common constituents of the gut microbiome of humans, ruminants, and termites
but little is known about their diversity and abundance in other animals. Here, we analyse …