Antimicrobial resistance monitoring of water environments: a framework for standardized methods and quality control

K Liguori, I Keenum, BC Davis, J Calarco… - … science & technology, 2022 - ACS Publications
Antimicrobial resistance (AMR) is a grand societal challenge with important dimensions in
the water environment that contribute to its evolution and spread. Environmental monitoring …

[HTML][HTML] Towards monitoring of antimicrobial resistance in the environment: for what reasons, how to implement it, and what are the data needs?

J Bengtsson-Palme, A Abramova, TU Berendonk… - Environment …, 2023 - Elsevier
Antimicrobial resistance (AMR) is a global threat to human and animal health and well-
being. To understand AMR dynamics, it is important to monitor resistant bacteria and …

[HTML][HTML] Assessment of global health risk of antibiotic resistance genes

Z Zhang, Q Zhang, T Wang, N Xu, T Lu, W Hong… - Nature …, 2022 - nature.com
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health in
the last decade. Many genes can confer resistance, but evaluating the relative health risks of …

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

BP Alcock, W Huynh, R Chalil, KW Smith… - Nucleic acids …, 2023 - academic.oup.com
Abstract The Comprehensive Antibiotic Resistance Database (CARD; card. mcmaster. ca)
combines the Antibiotic Resistance Ontology (ARO) with curated AMR gene (ARG) …

Toward a universal unit for quantification of antibiotic resistance genes in environmental samples

X Yin, X Chen, XT Jiang, Y Yang, B Li… - Environmental …, 2023 - ACS Publications
Surveillance of antibiotic resistance genes (ARGs) has been increasingly conducted in
environmental sectors to complement the surveys in human and animal sectors under the …

Good microbes, bad genes? The dissemination of antimicrobial resistance in the human microbiome

A Crits-Christoph, HA Hallowell, K Koutouvalis… - Gut …, 2022 - Taylor & Francis
ABSTRACT A global rise in antimicrobial resistance among pathogenic bacteria has proved
to be a major public health threat, with the rate of multidrug-resistant bacterial infections …

[HTML][HTML] ARGs-OAP v3. 0: Antibiotic-resistance gene database curation and analysis pipeline optimization

X Yin, X Zheng, L Li, AN Zhang, XT Jiang, T Zhang - Engineering, 2023 - Elsevier
Antibiotic resistance, which is encoded by antibiotic-resistance genes (ARGs), has
proliferated to become a growing threat to public health around the world. With technical …

Latent antibiotic resistance genes are abundant, diverse, and mobile in human, animal, and environmental microbiomes

JS Inda-Díaz, D Lund, M Parras-Moltó, A Johnning… - Microbiome, 2023 - Springer
Background Bacterial communities in humans, animals, and the external environment
maintain a large collection of antibiotic resistance genes (ARGs). However, few of these …

Wastewater surveillance of antibiotic-resistant bacterial pathogens: A systematic review

A Tiwari, P Kurittu, AI Al-Mustapha, V Heljanko… - Frontiers in …, 2022 - frontiersin.org
Infectious diseases caused by antibiotic-resistant bacterial (ARB) pathogens are a serious
threat to human and animal health. The active surveillance of ARB using an integrated one …

[HTML][HTML] Database resources of the National Center for Biotechnology Information in 2023

EW Sayers, EE Bolton, JR Brister, K Canese… - Nucleic acids …, 2023 - ncbi.nlm.nih.gov
Abstract The National Center for Biotechnology Information (NCBI) provides online
information resources for biology, including the GenBank® nucleic acid sequence database …