Fusion protein linkers: property, design and functionality

X Chen, JL Zaro, WC Shen - Advanced drug delivery reviews, 2013 - Elsevier
As an indispensable component of recombinant fusion proteins, linkers have shown
increasing importance in the construction of stable, bioactive fusion proteins. This review …

β-Peptides: from structure to function

RP Cheng, SH Gellman, WF DeGrado - Chemical reviews, 2001 - ACS Publications
In recent years, our understanding of protein structure and function has advanced rapidly,
providing a mechanistic understanding of a wide variety of biological processes. As an …

ff19SB: amino-acid-specific protein backbone parameters trained against quantum mechanics energy surfaces in solution

C Tian, K Kasavajhala, KAA Belfon… - Journal of chemical …, 2019 - ACS Publications
Molecular dynamics (MD) simulations have become increasingly popular in studying the
motions and functions of biomolecules. The accuracy of the simulation, however, is highly …

A helix propensity scale based on experimental studies of peptides and proteins

CN Pace, JM Scholtz - Biophysical journal, 1998 - cell.com
The average globular protein contains 30% α-helix, the most common type of secondary
structure. Some amino acids occur more frequently in α-helices than others; this tendency is …

Cold-adapted enzymes

KS Siddiqui, R Cavicchioli - Annu. Rev. Biochem., 2006 - annualreviews.org
By far the largest proportion of the Earth's biosphere is comprised of organisms that thrive in
cold environments (psychrophiles). Their ability to proliferate in the cold is predicated on a …

An analysis of protein domain linkers: their classification and role in protein folding

RA George, J Heringa - Protein engineering, 2002 - academic.oup.com
Recent advances in protein engineering have come from creating multi-functional chimeric
proteins containing modules from various proteins. These modules are typically joined via …

Design of folded peptides

J Venkatraman, SC Shankaramma… - Chemical reviews, 2001 - ACS Publications
The construction of complex protein folds relies on the precise conversion of a linear
polypeptide chain into a compact 3-dimensional structure. The interplay of forces that link …

High-resolution protein design with backbone freedom

PB Harbury, JJ Plecs, B Tidor, T Alber, PS Kim - Science, 1998 - science.org
Recent advances in computational techniques have allowed the design of precise side-
chain packing in proteins with predetermined, naturally occurring backbone structures …

Polymer principles and protein folding

KA Dill - Protein Science, 1999 - cambridge.org
This paper surveys the emerging role of statistical mechanics and polymer theory in protein
folding. In the polymer perspective, the folding code is more a solvation code than a code of …

De novo design and structural characterization of proteins and metalloproteins

WF DeGrado, CM Summa, V Pavone… - Annual review of …, 1999 - annualreviews.org
▪ Abstract De novo protein design has recently emerged as an attractive approach for
studying the structure and function of proteins. This approach critically tests our …