Viral quasispecies evolution

E Domingo, J Sheldon, C Perales - Microbiology and Molecular …, 2012 - Am Soc Microbiol
Evolution of RNA viruses occurs through disequilibria of collections of closely related mutant
spectra or mutant clouds termed viral quasispecies. Here we review the origin of the …

Quasispecies as a matter of fact: viruses and beyond

S Ojosnegros, C Perales, A Mas, E Domingo - Virus research, 2011 - Elsevier
We review the origins of the quasispecies concept and its relevance for RNA virus evolution,
viral pathogenesis and antiviral treatment strategies. We emphasize a critical point of …

Inference with viral quasispecies diversity indices: clonal and NGS approaches

J Gregori, M Salicru, E Domingo, A Sanchez… - …, 2014 - academic.oup.com
Given the inherent dynamics of a viral quasispecies, we are often interested in the
comparison of diversity indices of sequential samples of a patient, or in the comparison of …

[HTML][HTML] Involvement of a joker mutation in a polymerase-independent lethal mutagenesis escape mechanism

R Agudo, I de la Higuera, A Arias, A Grande-Pérez… - Virology, 2016 - Elsevier
We previously characterized a foot-and-mouth disease virus (FMDV) with three amino acid
replacements in its polymerase (3D) that conferred resistance to the mutagenic nucleoside …

Lethal mutagenesis of viruses

C Perales, V Martin, E Domingo - Current Opinion in Virology, 2011 - Elsevier
Lethal mutagenesis aims at extinguishing viruses by increased mutagenesis prompted by
virus-specific mutagenic agents, mainly nucleoside analogues. It is derived from the error …

Quasispecies dynamics of RNA viruses

MA Martínez, G Martrus, E Capel, M Parera… - … : Essential Agents of Life, 2012 - Springer
RNA viruses, such as human immunodeficiency virus, hepatitis C virus, influenza virus, and
poliovirus replicate with very high mutation rates and exhibit very high genetic diversity. The …

Arenaviruses and lethal mutagenesis. Prospects for new ribavirin-based interventions

H Moreno, A Grande-Pérez, E Domingo, V Martín - Viruses, 2012 - mdpi.com
Lymphocytic choriomeningitis virus (LCMV) has contributed to unveil some of the molecular
mechanisms of lethal mutagenesis, or loss of virus infectivity due to increased mutation …

Mutagenesis-mediated virus extinction: virus-dependent effect of viral load on sensitivity to lethal defection

H Moreno, H Tejero, JC De la Torre, E Domingo… - PloS one, 2012 - journals.plos.org
Background Lethal mutagenesis is a transition towards virus extinction mediated by
enhanced mutation rates during viral genome replication, and it is currently under …

Lethal mutagenesis of foot-and-mouth disease virus involves shifts in sequence space

C Perales, M Henry, E Domingo… - Journal of …, 2011 - Am Soc Microbiol
Lethal mutagenesis or virus transition into error catastrophe is an antiviral strategy that aims
at extinguishing a virus by increasing the viral mutation rates during replication. The …

Viral fitness, population complexity, host interactions, and resistance to antiviral agents

E Domingo, C García-Crespo, ME Soria… - Viral Fitness and …, 2023 - Springer
Fitness of viruses has become a standard parameter to quantify their adaptation to a
biological environment. Fitness determinations for RNA viruses (and some highly variable …