Cells execute their functions through dynamic operations of biological networks. Dynamic
networks delineate the operation of biological networks in terms of temporal changes of …

Curated databases in bioinformatics and other disciplines are the result of a great deal of
manual annotation, correction and transfer of data from other sources. Provenance …

A map of protein–protein interactions provides valuable insight into the cellular function and
machinery of a proteome. By measuring the similarity between two Gene Ontology (GO) …

Here we present ComPPI, a cellular compartment-specific database of proteins and their
interactions enabling an extensive, compartmentalized protein–protein interaction network …

Genomic sequences are being deciphered at an unprecedented pace, and the demand for
sequence data is also continuously growing, fuelled by thrilling potential applications which …

Caenorhabditis elegans is a powerful model to study metabolism and how it relates to
nutrition, gene expression, and life history traits. However, while numerous experimental …

Protein interaction data exists in a number of repositories. Each repository has its own data
format, molecule identifier and supplementary information. Michigan Molecular Interactions …

Mitochondria are considered as one of the core organelles of eukaryotic cells hence
prediction of mitochondrial proteins is one of the major challenges in the field of genome …

In higher eukaryotes, messenger RNAs (mRNAs) are exported from the nucleus to the
cytoplasm via factors deposited near the 5′ end of the transcript during splicing. The signal …

A complete map of the Arabidopsis (Arabidopsis thaliana) proteome is clearly a major goal
for the plant research community in terms of determining the function and regulation of each …