The influence of LINE‐1 and SINE retrotransposons on mammalian genomes

SR Richardson, AJ Doucet, HC Kopera… - Mobile DNA …, 2015 - Wiley Online Library
Transposable elements (TEs) or “jumping genes” historically have been disparaged as a
class of “junk DNA” in mammalian genomes (1, 2). The advent of whole genome DNA …

Short retroposons in eukaryotic genomes

DA Kramerov, NS Vassetzky - International review of cytology, 2005 - Elsevier
Short retroposons (SINEs) are repetitive elements amplified in the genome via an RNA
intermediate, using the enzymatic machinery of autonomous retroposons (LINEs). SINEs are …

Initial sequencing and comparative analysis of the mouse genome

European Bioinformatics Institute: Birney Ewan 3 … - Nature, 2002 - nature.com
The sequence of the mouse genome is a key informational tool for understanding the
contents of the human genome and a key experimental tool for biomedical research. Here …

Origin and evolution of SINEs in eukaryotic genomes

DA Kramerov, NS Vassetzky - Heredity, 2011 - nature.com
Short interspersed elements (SINEs) are one of the two most prolific mobile genomic
elements in most of the higher eukaryotes. Although their biology is still not thoroughly …

Exaptation of Transposable Elements into Novel Cis-Regulatory Elements: Is the Evidence Always Strong?

FSJ de Souza, LF Franchini… - Molecular biology and …, 2013 - academic.oup.com
Transposable elements (TEs) are mobile genetic sequences that can jump around the
genome from one location to another, behaving as genomic parasites. TEs have been …

SINEBase: a database and tool for SINE analysis

NS Vassetzky, DA Kramerov - Nucleic acids research, 2013 - academic.oup.com
Abstract SINEBase (http://sines. eimb. ru) integrates the revisited body of knowledge about
short interspersed elements (SINEs). A set of formal definitions concerning SINEs was …

The biological properties and evolutionary dynamics of mammalian LINE-1 retrotransposons

AV Furano - 2000 - Elsevier
Abstract Mammalian LINE-1 (L1) elements belong to the superfamily of autonomously
replicating retrotransposable elements that lack the long terminal repeated (LTR) sequences …

Evolution of microRNAs located within Hox gene clusters

A Tanzer, CT Amemiya, CB Kim… - Journal of Experimental …, 2005 - Wiley Online Library
MicroRNAs (miRNAs) form an abundant class of non‐coding RNA genes that have an
important function in post‐transcriptional gene regulation and in particular modulate the …

Localization of MMR proteins on meiotic chromosomes in mice indicates distinct functions during prophase I

NK Kolas, A Svetlanov, ML Lenzi, FP Macaluso… - The Journal of cell …, 2005 - rupress.org
Mammalian MutL homologues function in DNA mismatch repair (MMR) after replication
errors and in meiotic recombination. Both functions are initiated by a heterodimer of MutS …

Ro-associated Y RNAs in metazoans: evolution and diversification

J Perreault, JP Perreault, G Boire - Molecular biology and …, 2007 - academic.oup.com
The Y genes encode small noncoding RNAs whose functions remain elusive, whose
numbers vary between species, and whose major property is to be bound by the Ro60 …