Artificial intelligence for natural product drug discovery

MW Mullowney, KR Duncan, SS Elsayed… - Nature Reviews Drug …, 2023 - nature.com
Developments in computational omics technologies have provided new means to access
the hidden diversity of natural products, unearthing new potential for drug discovery. In …

A review of large language models and autonomous agents in chemistry

MC Ramos, CJ Collison, AD White - Chemical Science, 2025 - pubs.rsc.org
Large language models (LLMs) have emerged as powerful tools in chemistry, significantly
impacting molecule design, property prediction, and synthesis optimization. This review …

Git-mol: A multi-modal large language model for molecular science with graph, image, and text

P Liu, Y Ren, J Tao, Z Ren - Computers in biology and medicine, 2024 - Elsevier
Large language models have made significant strides in natural language processing,
enabling innovative applications in molecular science by processing textual representations …

ReactionDataExtractor 2.0: A deep learning approach for data extraction from chemical reaction schemes

DM Wilary, JM Cole - Journal of Chemical Information and …, 2023 - ACS Publications
Knowledge in the chemical domain is often disseminated graphically via chemical reaction
schemes. The task of describing chemical transformations is greatly simplified by introducing …

[HTML][HTML] State-of-the-art deep learning methods on electrocardiogram data: systematic review

G Petmezas, L Stefanopoulos, V Kilintzis… - JMIR medical …, 2022 - medinform.jmir.org
Background Electrocardiogram (ECG) is one of the most common noninvasive diagnostic
tools that can provide useful information regarding a patient's health status. Deep learning …

DECIMER. ai: an open platform for automated optical chemical structure identification, segmentation and recognition in scientific publications

K Rajan, HO Brinkhaus, MI Agea, A Zielesny… - Nature …, 2023 - nature.com
The number of publications describing chemical structures has increased steadily over the
last decades. However, the majority of published chemical information is currently not …

MolScribe: robust molecular structure recognition with image-to-graph generation

Y Qian, J Guo, Z Tu, Z Li, CW Coley… - Journal of Chemical …, 2023 - ACS Publications
Molecular structure recognition is the task of translating a molecular image into its graph
structure. Significant variation in drawing styles and conventions exhibited in chemical …

SwinOCSR: end-to-end optical chemical structure recognition using a Swin Transformer

Z Xu, J Li, Z Yang, S Li, H Li - Journal of Cheminformatics, 2022 - Springer
Optical chemical structure recognition from scientific publications is essential for
rediscovering a chemical structure. It is an extremely challenging problem, and current rule …

Artificial intelligence and cheminformatics tools: a contribution to the drug development and chemical science

I Saifi, BA Bhat, SS Hamdani, UY Bhat… - Journal of …, 2024 - Taylor & Francis
In the ever-evolving field of drug discovery, the integration of Artificial Intelligence (AI) and
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …

[HTML][HTML] A review of transformers in drug discovery and beyond

J Jiang, L Chen, L Ke, B Dou, C Zhang, H Feng… - Journal of …, 2024 - Elsevier
Transformer models have emerged as pivotal tools within the realm of drug discovery,
distinguished by their unique architectural features and exceptional performance in …