Practical guidelines for the comprehensive analysis of ChIP-seq data
Mapping the chromosomal locations of transcription factors, nucleosomes, histone
modifications, chromatin remodeling enzymes, chaperones, and polymerases is one of the …
modifications, chromatin remodeling enzymes, chaperones, and polymerases is one of the …
A survey of motif finding Web tools for detecting binding site motifs in ChIP-Seq data
NTL Tran, CH Huang - Biology direct, 2014 - Springer
ChIP-Seq (chromatin immunoprecipitation sequencing) has provided the advantage for
finding motifs as ChIP-Seq experiments narrow down the motif finding to binding site …
finding motifs as ChIP-Seq experiments narrow down the motif finding to binding site …
Human transposon insertion profiling: analysis, visualization and identification of somatic LINE-1 insertions in ovarian cancer
Mammalian genomes are replete with interspersed repeats reflecting the activity of
transposable elements. These mobile DNAs are self-propagating, and their continued …
transposable elements. These mobile DNAs are self-propagating, and their continued …
JAMM: a peak finder for joint analysis of NGS replicates
Motivation: Although peak finding in next-generation sequencing (NGS) datasets has been
addressed extensively, there is no consensus on how to analyze and process biological …
addressed extensively, there is no consensus on how to analyze and process biological …
Mapping transcription regulatory networks with ChIP-seq and RNA-seq
JT Wade - Prokaryotic systems biology, 2015 - Springer
Bacterial genomes encode numerous transcription factors, DNA-binding proteins that
regulate transcription initiation. Identifying the regulatory targets of transcription factors is a …
regulate transcription initiation. Identifying the regulatory targets of transcription factors is a …
Improving data and prediction quality of high-throughput perovskite synthesis with model fusion
Y Tang, Z Li, MAN Nellikkal, H Eramian… - Journal of chemical …, 2021 - ACS Publications
Combinatorial fusion analysis (CFA) is an approach for combining multiple scoring systems
using the rank-score characteristic function and cognitive diversity measure. One example is …
using the rank-score characteristic function and cognitive diversity measure. One example is …
Identifying Distributed Denial of Service Attacks through Multi-Model Deep Learning Fusion and Combinatorial Analysis
Abstract Distributed Denial of Service (DDoS) attacks pose a major threat to organizations
by overwhelming their networks and servers. Effective identification of DDoS attacks is …
by overwhelming their networks and servers. Effective identification of DDoS attacks is …
Advancing ncaa march madness forecasts through deep learning and combinatorial fusion analysis
This paper presents a novel methodology for accurately predicting game outcomes in the
NCAA Men's Basketball Tournament, known as March Madness. The high variance inherent …
NCAA Men's Basketball Tournament, known as March Madness. The high variance inherent …
Cognitive diversity: A measurement of dissimilarity between multiple scoring systems
In the context of computing and informatics, Cognitive Diversity (CD) has been proposed to
characterize the degree of dissimilarity between multiple scoring systems (MSS). As such …
characterize the degree of dissimilarity between multiple scoring systems (MSS). As such …
Preference prediction based on eye movement using multi-layer combinatorial fusion
C Schweikert, L Gobin, S Xie, S Shimojo… - … Conference, BI 2018 …, 2018 - Springer
Face image preference is influenced by many factors and can be detected by analyzing eye
movement data. When comparing two face images, our gaze shifts within and between the …
movement data. When comparing two face images, our gaze shifts within and between the …