Mechanisms of hypoxia signalling: new implications for nephrology

J Schödel, PJ Ratcliffe - Nature Reviews Nephrology, 2019 - nature.com
Studies of the regulation of erythropoietin (EPO) production by the liver and kidneys, one of
the classical physiological responses to hypoxia, led to the discovery of human oxygen …

2-Oxoglutarate-dependent oxygenases

MS Islam, TM Leissing, R Chowdhury… - Annual review of …, 2018 - annualreviews.org
2-Oxoglutarate (2OG)-dependent oxygenases (2OGXs) catalyze a remarkably diverse range
of oxidative reactions. In animals, these comprise hydroxylations and N-demethylations …

The elemental role of iron in DNA synthesis and repair

S Puig, L Ramos-Alonso, AM Romero… - Metallomics, 2017 - academic.oup.com
Iron is an essential redox element that functions as a cofactor in many metabolic pathways.
Critical enzymes in DNA metabolism, including multiple DNA repair enzymes (helicases …

Translational control through ribosome heterogeneity and functional specialization

DM Gay, AH Lund, MD Jansson - Trends in biochemical sciences, 2022 - cell.com
The conceptual origins of ribosome specialization can be traced back to the earliest days of
molecular biology. Yet, this field has only recently begun to gather momentum, with …

Amazing diversity in biochemical roles of Fe (II)/2-oxoglutarate oxygenases

CQ Herr, RP Hausinger - Trends in Biochemical Sciences, 2018 - cell.com
Since their discovery in the 1960s, the family of Fe (II)/2-oxoglutarate-dependent
oxygenases has undergone a tremendous expansion to include enzymes catalyzing a vast …

High-resolution structure of the Escherichia coli ribosome

J Noeske, MR Wasserman, DS Terry… - Nature structural & …, 2015 - nature.com
Protein synthesis by the ribosome is highly dependent on the ionic conditions in the cellular
environment, but the roles of ribosome solvation have remained poorly understood …

Protein hydroxylation catalyzed by 2-oxoglutarate-dependent oxygenases

S Markolovic, SE Wilkins, CJ Schofield - Journal of Biological Chemistry, 2015 - ASBMB
The post-translational hydroxylation of prolyl and lysyl residues, as catalyzed by 2-
oxoglutarate (2OG)-dependent oxygenases, was first identified in collagen biosynthesis …

The impact of oxidative stress on ribosomes: from injury to regulation

N Shcherbik, DG Pestov - Cells, 2019 - mdpi.com
The ribosome is a complex ribonucleoprotein-based molecular machine that orchestrates
protein synthesis in the cell. Both ribosomal RNA and ribosomal proteins can be chemically …

OGFOD1 catalyzes prolyl hydroxylation of RPS23 and is involved in translation control and stress granule formation

RS Singleton, P Liu-Yi, F Formenti… - Proceedings of the …, 2014 - National Acad Sciences
2-Oxoglutarate (2OG) and Fe (II)-dependent oxygenase domain-containing protein 1
(OGFOD1) is predicted to be a conserved 2OG oxygenase, the catalytic domain of which is …

Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy

C Loenarz, R Sekirnik, A Thalhammer… - Proceedings of the …, 2014 - National Acad Sciences
The mechanisms by which gene expression is regulated by oxygen are of considerable
interest from basic science and therapeutic perspectives. Using mass spectrometric …