Methods in virus diagnostics: from ELISA to next generation sequencing
Despite the seemingly continuous development of newer and ever more elaborate methods
for detecting and identifying viruses, very few of these new methods get adopted for routine …
for detecting and identifying viruses, very few of these new methods get adopted for routine …
Historical perspective, development and applications of next-generation sequencing in plant virology
M Barba, H Czosnek, A Hadidi - Viruses, 2014 - mdpi.com
Next-generation high throughput sequencing technologies became available at the onset of
the 21st century. They provide a highly efficient, rapid, and low cost DNA sequencing …
the 21st century. They provide a highly efficient, rapid, and low cost DNA sequencing …
Identification of diverse mycoviruses through metatranscriptomics characterization of the viromes of five major fungal plant pathogens
SYL Marzano, BD Nelson, O Ajayi-Oyetunde… - Journal of …, 2016 - Am Soc Microbiol
Mycoviruses can have a marked effect on natural fungal communities and influence plant
health and productivity. However, a comprehensive picture of mycoviral diversity is still …
health and productivity. However, a comprehensive picture of mycoviral diversity is still …
Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research
Phylogenetic analyses have prompted a taxonomic reorganization of family Partitiviridae
(encapsidated, bisegmented dsRNA viruses that infect plants, fungi, or protozoa), the focus …
(encapsidated, bisegmented dsRNA viruses that infect plants, fungi, or protozoa), the focus …
A framework for the evaluation of biosecurity, commercial, regulatory, and scientific impacts of plant viruses and viroids identified by NGS technologies
Recent advances in high-throughput sequencing technologies and bioinformatics have
generated huge new opportunities for discovering and diagnosing plant viruses and viroids …
generated huge new opportunities for discovering and diagnosing plant viruses and viroids …
The family Narnaviridae: simplest of RNA viruses
BI Hillman, G Cai - Advances in virus research, 2013 - Elsevier
Members of the virus family Narnaviridae contain the simplest genomes of any RNA virus,
ranging from 2.3 to 3.6 kb and encoding only a single polypeptide that has an RNA …
ranging from 2.3 to 3.6 kb and encoding only a single polypeptide that has an RNA …
Identification of viruses and viroids by next-generation sequencing and homology-dependent and homology-independent algorithms
Q Wu, SW Ding, Y Zhang, S Zhu - Annual review of …, 2015 - annualreviews.org
A fast, accurate, and full indexing of viruses and viroids in a sample for the inspection and
quarantine services and disease management is desirable but was unrealistic until recently …
quarantine services and disease management is desirable but was unrealistic until recently …
Current impact and future directions of high throughput sequencing in plant virus diagnostics
The ability to provide a fast, inexpensive and reliable diagnostic for any given viral infection
is a key parameter in efforts to fight and control these ubiquitous pathogens. The recent …
is a key parameter in efforts to fight and control these ubiquitous pathogens. The recent …
Understanding the diversity, evolution, ecology, and applications of mycoviruses
J Xie, D Jiang - Annual Review of Microbiology, 2024 - annualreviews.org
Mycoviruses are widely distributed among various kinds of fungi. Over the past 10 years,
more novel mycoviruses have been discovered with the use of high-throughput sequencing …
more novel mycoviruses have been discovered with the use of high-throughput sequencing …
[HTML][HTML] Development of a virus detection and discovery pipeline using next generation sequencing
T Ho, IE Tzanetakis - Virology, 2014 - Elsevier
Next generation sequencing (NGS) has revolutionized virus discovery. Notwithstanding, a
vertical pipeline, from sample preparation to data analysis, has not been available to the …
vertical pipeline, from sample preparation to data analysis, has not been available to the …