Chemical and biochemical perspectives of protein lysine methylation

M Luo - Chemical reviews, 2018 - ACS Publications
Protein lysine methylation is a distinct posttranslational modification that causes minimal
changes in the size and electrostatic status of lysine residues. Lysine methylation plays …

Enhancer biology and enhanceropathies

E Smith, A Shilatifard - Nature structural & molecular biology, 2014 - nature.com
Enhancers are cis-regulatory elements that enable precise spatiotemporal patterns of gene
expression during development and are notable for being able to function at large distances …

PAF1, a molecular regulator of promoter-proximal pausing by RNA polymerase II

FX Chen, AR Woodfin, A Gardini, RA Rickels… - Cell, 2015 - cell.com
The control of promoter-proximal pausing and the release of RNA polymerase II (Pol II) is a
widely used mechanism for regulating gene expression in metazoans, especially for genes …

Determinants of histone H3K4 methylation patterns

LM Soares, PC He, Y Chun, H Suh, TS Kim… - Molecular cell, 2017 - cell.com
Various factors differentially recognize trimethylated histone H3 lysine 4 (H3K4me3) near
promoters, H3K4me2 just downstream, and promoter-distal H3K4me1 to modulate gene …

Set1/COMPASS and Mediator are repurposed to promote epigenetic transcriptional memory

A D'Urso, Y Takahashi, B Xiong, J Marone, R Coukos… - Elife, 2016 - elifesciences.org
In yeast and humans, previous experiences can lead to epigenetic transcriptional memory:
repressed genes that exhibit mitotically heritable changes in chromatin structure and …

Tri-methylation of histone H3 lysine 4 facilitates gene expression in ageing cells

C Cruz, M Della Rosa, C Krueger, Q Gao, D Horkai… - Elife, 2018 - elifesciences.org
Transcription of protein coding genes is accompanied by recruitment of COMPASS to
promoter-proximal chromatin, which methylates histone H3 lysine 4 (H3K4) to form …

Crystal structure of the COMPASS H3K4 methyltransferase catalytic module

PL Hsu, H Li, HT Lau, C Leonen, A Dhall, SE Ong… - Cell, 2018 - cell.com
The SET1/MLL family of histone methyltransferases is conserved in eukaryotes and
regulates transcription by catalyzing histone H3K4 mono-, di-, and tri-methylation. These …

Biochemical reconstitution and phylogenetic comparison of human SET1 family core complexes involved in histone methylation

SA Shinsky, KE Monteith, S Viggiano… - Journal of Biological …, 2015 - ASBMB
Mixed lineage leukemia protein-1 (MLL1) is a member of the SET1 family of histone H3
lysine 4 (H3K4) methyltransferases that are required for metazoan development. MLL1 is the …

Structure and conformational dynamics of a COMPASS histone H3K4 methyltransferase complex

Q Qu, Y Takahashi, Y Yang, H Hu, Y Zhang… - Cell, 2018 - cell.com
The methylation of histone 3 lysine 4 (H3K4) is carried out by an evolutionarily conserved
family of methyltransferases referred to as complex of proteins associated with Set1 …

The complex activities of the SET1/MLL complex core subunits in development and disease

H Jiang - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2020 - Elsevier
In mammalian cells, the SET1/MLL complexes are the main writers of the H3K4 methyl mark
that is associated with active gene expression. The activities of these complexes are …