The return of metabolism: biochemistry and physiology of the pentose phosphate pathway

A Stincone, A Prigione, T Cramer… - Biological …, 2015 - Wiley Online Library
The pentose phosphate pathway (PPP) is a fundamental component of cellular metabolism.
The PPP is important to maintain carbon homoeostasis, to provide precursors for nucleotide …

A fungal family of transcriptional regulators: the zinc cluster proteins

S MacPherson, M Larochelle… - … and Molecular Biology …, 2006 - Am Soc Microbiol
The trace element zinc is required for proper functioning of a large number of proteins,
including various enzymes. However, most zinc-containing proteins are transcription factors …

[HTML][HTML] Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors

P Kemmeren, K Sameith, LAL Van De Pasch… - Cell, 2014 - cell.com
To understand regulatory systems, it would be useful to uniformly determine how different
components contribute to the expression of all other genes. We therefore monitored mRNA …

[HTML][HTML] A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

G Badis, ET Chan, H van Bakel, L Pena-Castillo, D Tillo… - Molecular cell, 2008 - cell.com
The sequence specificity of DNA-binding proteins is the primary mechanism by which the
cell recognizes genomic features. Here, we describe systematic determination of yeast …

Thiamin confers enhanced tolerance to oxidative stress in Arabidopsis

M Tunc-Ozdemir, G Miller, L Song, J Kim… - Plant …, 2009 - academic.oup.com
Thiamin and thiamin pyrophosphate (TPP) are well known for their important roles in human
nutrition and enzyme catalysis. In this work, we present new evidence for an additional role …

Molecular and physiological basis of Saccharomyces cerevisiae tolerance to adverse lignocellulose-based process conditions

JT Cunha, A Romaní, CE Costa, I Sá-Correia… - Applied microbiology …, 2019 - Springer
Lignocellulose-based biorefineries have been gaining increasing attention to substitute
current petroleum-based refineries. Biomass processing requires a pretreatment step to …

Transcriptional regulation of nonfermentable carbon utilization in budding yeast

B Turcotte, XB Liang, F Robert… - FEMS yeast …, 2009 - academic.oup.com
Saccharomyces cerevisiae preferentially uses glucose as a carbon source, but following its
depletion, it can utilize a wide variety of other carbons including nonfermentable compounds …

The pentose phosphate pathway in yeasts–more than a poor cousin of glycolysis

LK Bertels, L Fernández Murillo, JJ Heinisch - Biomolecules, 2021 - mdpi.com
The pentose phosphate pathway (PPP) is a route that can work in parallel to glycolysis in
glucose degradation in most living cells. It has a unidirectional oxidative part with glucose-6 …

Molecular mechanisms of yeast tolerance and in situ detoxification of lignocellulose hydrolysates

ZL Liu - Applied microbiology and biotechnology, 2011 - Springer
Pretreatment of lignocellulose biomass for biofuel production generates inhibitory
compounds that interfere with microbial growth and subsequent fermentation. Remediation …

Efficient production of lycopene in Saccharomyces cerevisiae by enzyme engineering and increasing membrane flexibility and NAPDH production

J Hong, SH Park, S Kim, SW Kim, JS Hahn - Applied microbiology and …, 2019 - Springer
Lycopene is a red carotenoid pigment with strong antioxidant activity. Saccharomyces
cerevisiae is considered a promising host to produce lycopene, but lycopene toxicity is one …