Microbial interactions for nutrient acquisition in soil: miners, scavengers, and carriers

T Cao, Y Luo, M Shi, X Tian, Y Kuzyakov - Soil Biology and Biochemistry, 2024 - Elsevier
Microbial interactions in soil are hidden, as they occur stealthily in a 'dark box'. This greatly
limits our understanding of microbial functions. Here, soil microorganisms were classified …

Degradation or humification: rethinking strategies to attenuate organic pollutants

S Wang, Y Wang, X He, Q Lu - Trends in Biotechnology, 2022 - cell.com
The fate of organic pollutants in environmental matrices can be determined by degradation
and humification. The humification process represents a promising strategy to remove …

Reed restoration decreased nutrients in wetlands with dredged sediments: Microbial community assembly and function in rhizosphere

Y Song, S Zhang, J Lu, R Duan, H Chen, Y Ma… - Journal of …, 2023 - Elsevier
Using dredged sediments as substrate for aquatic plants is a low-cost and ecological
friendly way for in situ aquatic ecological restoration. However, the limited information …

Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle

I Beidler, N Steinke, T Schulze, C Sidhu… - Nature …, 2024 - nature.com
Phytoplankton blooms provoke bacterioplankton blooms, from which bacterial biomass
(necromass) is released via increased zooplankton grazing and viral lysis. While bacterial …

Knowns and unknowns of the soil fungal necrobiome

PG Kennedy, F Maillard - Trends in Microbiology, 2023 - cell.com
Dead microbial cells, commonly referred to as necromass, are increasingly recognized as
an important source of both persistent carbon as well as nutrient availability in soils. Studies …

Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments

S Pérez Castro, MA Borton, K Regan… - The ISME …, 2021 - academic.oup.com
Hydrothermal sediments contain large numbers of uncultured heterotrophic microbial
lineages. Here, we amended Guaymas Basin sediments with proteins, polysaccharides …

Comparative analysis of microbial communities between water and sediment in Laoshan Bay marine ranching with varied aquaculture activities

G Fang, H Yu, H Sheng, Y Tang, Z Liang - Marine Pollution Bulletin, 2021 - Elsevier
We profiled and compared the bacterial and protist community compositions and dynamics
in the Laoshan Bay marine ranching involving varied aquaculture activities. The dominant …

Metagenomics reveals bacterioplankton community adaptation to long-term thermal pollution through the strategy of functional regulation in a subtropical bay

L Ren, Z Lu, X Xia, Y Peng, S Gong, X Song… - Water Research, 2022 - Elsevier
Thermal effluents from coastal nuclear power plants have led to undesirable pollution and
subsequent ecological impacts on local marine ecosystems. However, despite the …

Catabolic protein degradation in marine sediments confined to distinct archaea

X Yin, G Zhou, M Cai, QZ Zhu… - The ISME …, 2022 - academic.oup.com
Metagenomic analysis has facilitated prediction of a variety of carbon utilization potentials by
uncultivated archaea including degradation of protein, which is a wide-spread carbon …

Fungal diversity and community composition across ecosystems

P Debeljak, F Baltar - Journal of Fungi, 2023 - mdpi.com
Fungi have shaped the biosphere since the development of life on Earth. Despite fungi
being present in all environments, most of the available fungal research has focused on …