Machine learning for medical imaging: methodological failures and recommendations for the future

G Varoquaux, V Cheplygina - NPJ digital medicine, 2022 - nature.com
Research in computer analysis of medical images bears many promises to improve patients'
health. However, a number of systematic challenges are slowing down the progress of the …

[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

Probable domain generalization via quantile risk minimization

C Eastwood, A Robey, S Singh… - Advances in …, 2022 - proceedings.neurips.cc
Abstract Domain generalization (DG) seeks predictors which perform well on unseen test
distributions by leveraging data drawn from multiple related training distributions or …

A survey on bias in visual datasets

S Fabbrizzi, S Papadopoulos, E Ntoutsi… - Computer Vision and …, 2022 - Elsevier
Computer Vision (CV) has achieved remarkable results, outperforming humans in several
tasks. Nonetheless, it may result in significant discrimination if not handled properly. Indeed …

[HTML][HTML] Data harmonisation for information fusion in digital healthcare: A state-of-the-art systematic review, meta-analysis and future research directions

Y Nan, J Del Ser, S Walsh, C Schönlieb, M Roberts… - Information …, 2022 - Elsevier
Removing the bias and variance of multicentre data has always been a challenge in large
scale digital healthcare studies, which requires the ability to integrate clinical features …

[HTML][HTML] Deep learning-based unlearning of dataset bias for MRI harmonisation and confound removal

NK Dinsdale, M Jenkinson, AIL Namburete - NeuroImage, 2021 - Elsevier
Increasingly large MRI neuroimaging datasets are becoming available, including many
highly multi-site multi-scanner datasets. Combining the data from the different scanners is …

[HTML][HTML] Openbhb: a large-scale multi-site brain mri data-set for age prediction and debiasing

B Dufumier, A Grigis, J Victor, C Ambroise, V Frouin… - NeuroImage, 2022 - Elsevier
Prediction of chronological age from neuroimaging in the healthy population is an important
issue because the deviations from normal brain age may highlight abnormal trajectories …

[HTML][HTML] A multi-scanner neuroimaging data harmonization using RAVEL and ComBat

ME Torbati, DS Minhas, G Ahmad, EE O'Connor… - Neuroimage, 2021 - Elsevier
Modern neuroimaging studies frequently combine data collected from multiple scanners and
experimental conditions. Such data often contain substantial technical variability associated …

Population heterogeneity in clinical cohorts affects the predictive accuracy of brain imaging

O Benkarim, C Paquola, B Park, V Kebets, SJ Hong… - PLoS …, 2022 - journals.plos.org
Brain imaging research enjoys increasing adoption of supervised machine learning for
single-participant disease classification. Yet, the success of these algorithms likely depends …

A general primer for data harmonization

C Cheng, L Messerschmidt, I Bravo, M Waldbauer… - Scientific data, 2024 - nature.com
Data harmonization is an important method for combining or transforming data. To date
however, articles about data harmonization are field-specific and highly technical, making it …