Hfq and its constellation of RNA

J Vogel, BF Luisi - Nature Reviews Microbiology, 2011 - nature.com
Hfq is an RNA-binding protein that is common to diverse bacterial lineages and has key
roles in the control of gene expression. By facilitating the pairing of small RNAs with their …

Signal Transduction and Regulatory Mechanisms Involved in Control of the σS (RpoS) Subunit of RNA Polymerase

R Hengge-Aronis - Microbiology and molecular biology reviews, 2002 - Am Soc Microbiol
The σS (RpoS) subunit of RNA polymerase is the master regulator of the general stress
response in Escherichia coli and related bacteria. While rapidly growing cells contain very …

Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli

E Massé, FE Escorcia, S Gottesman - Genes & development, 2003 - genesdev.cshlp.org
RyhB is a small antisense regulatory RNA that is repressed by the Fur repressor and
negatively regulates at least six mRNAs encoding Fe-binding or Fe-storage proteins in …

Identification of novel small RNAs using comparative genomics and microarrays

KM Wassarman, F Repoila, C Rosenow… - Genes & …, 2001 - genesdev.cshlp.org
A burgeoning list of small RNAs with a variety of regulatory functions has been identified in
both prokaryotic and eukaryotic cells. However, it remains difficult to identify small RNAs by …

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq

A Sittka, S Lucchini, K Papenfort, CM Sharma… - PLoS …, 2008 - journals.plos.org
Recent advances in high-throughput pyrosequencing (HTPS) technology now allow a
thorough analysis of RNA bound to cellular proteins, and, therefore, of post-transcriptional …

Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

T Møller, T Franch, P Højrup, DR Keene, HP Bächinger… - Molecular cell, 2002 - cell.com
The bacterial Hfq protein modulates the stability or the translation of mRNAs and has
recently been shown to interact with small regulatory RNAs in E. coli. Here we show that Hfq …

Target activation by regulatory RNAs in bacteria

K Papenfort, CK Vanderpool - FEMS microbiology reviews, 2015 - academic.oup.com
Bacterial small regulatory RNAs (sRNAs) are commonly known to repress gene expression
by base pairing to target mRNAs. In many cases, sRNAs base pair with and sequester …

Global analysis of small RNA and mRNA targets of Hfq

A Zhang, KM Wassarman, C Rosenow… - Molecular …, 2003 - Wiley Online Library
Hfq, a bacterial member of the Sm family of RNA‐binding proteins, is required for the action
of many small regulatory RNAs that act by basepairing with target mRNAs. Hfq binds this …

A molecular Swiss army knife: OmpA structure, function and expression

SGJ Smith, V Mahon, MA Lambert… - FEMS microbiology …, 2007 - academic.oup.com
The OmpA outer membrane protein of Escherichia coli and other enterobacteria is a
multifaceted protein. This protein is expressed to very high levels and ompA is tightly …

[HTML][HTML] Structures of the pleiotropic translational regulator Hfq and an Hfq–RNA complex: a bacterial Sm‐like protein

MA Schumacher, RF Pearson, T Møller… - The EMBO …, 2002 - embopress.org
In prokaryotes, Hfq regulates translation by modulating the structure of numerous RNA
molecules by binding preferentially to A/U‐rich sequences. To elucidate the mechanisms of …