A tale of two components: a novel kinase and a regulatory switch

VL Robinson, DR Buckler, AM Stock - Nature structural biology, 2000 - nature.com
Histidine protein kinases and response regulators form the basis of phosphotransfer signal
transduction pathways. Commonly referred to as two-component systems, these modular …

Oxygen regulatory mechanisms of nitrogen fixation in rhizobia

PJ Rutten, PS Poole - Advances in microbial physiology, 2019 - Elsevier
Rhizobia are α-and β-proteobacteria that form a symbiotic partnership with legumes, fixing
atmospheric dinitrogen to ammonia and providing it to the plant. Oxygen regulation is key in …

Conformational changes in protein loops and helices induced by post-translational phosphorylation

ES Groban, A Narayanan… - PLoS computational …, 2006 - journals.plos.org
Post-translational phosphorylation is a ubiquitous mechanism for modulating protein activity
and protein-protein interactions. In this work, we examine how phosphorylation can …

Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic “snapshots” of intermediate states

W Wang, HS Cho, R Kim, J Jancarik, H Yokota… - Journal of molecular …, 2002 - Elsevier
Phosphoserine phosphatase (PSP) is a member of a large class of enzymes that catalyze
phosphoester hydrolysis using a phosphoaspartate–enzyme intermediate. PSP is a likely …

Crystal structure of activated CheY: comparison with other activated receiver domains

SY Lee, HS Cho, JG Pelton, D Yan, EA Berry… - Journal of Biological …, 2001 - ASBMB
The crystal structure of BeF 3−-activated CheY, with manganese in the magnesium binding
site, was determined at 2.4-Å resolution. BeF 3− bonds to Asp 57, the normal site of …

Kinetic buffering of cross talk between bacterial two-component sensors

ES Groban, EJ Clarke, HM Salis, SM Miller… - Journal of molecular …, 2009 - Elsevier
Two-component systems are a class of sensors that enable bacteria to respond to
environmental and cell-state signals. The canonical system consists of a membrane-bound …

Crystal structure of phosphoserine phosphatase from Methanococcus jannaschii, a hyperthermophile, at 1.8 Å resolution

W Wang, R Kim, J Jancarik, H Yokota, SH Kim - Structure, 2001 - cell.com
Background: D-Serine is a co-agonist of the N-methyl-D-aspartate subtype of glutamate
receptors, a major neurotransmitter receptor family in mammalian nervous systems. D …

Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics

A Pandini, A Fornili, F Fraternali, J Kleinjung - Biophysical Journal, 2012 - cell.com
Methods First, MD ensembles are mapped onto a canonical set of representative fragments,
ie a set of discrete 4-residue states [3]. By this mapping, the contribution of rigid fragment …

Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation

PG Leonard, D Golemi-Kotra… - Proceedings of the …, 2013 - National Acad Sciences
Staphylococcus aureus VraR, a vancomycin-resistance-associated response regulator,
activates a cell-wall–stress stimulon in response to antibiotics that inhibit cell wall formation …

Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima

DR Buckler, Y Zhou, AM Stock - Structure, 2002 - cell.com
Two-component systems, the predominant signal transduction strategy used by prokaryotes,
involve phosphorelay from a sensor histidine kinase (HK) to an intracellular response …