Phenotypic Variations, Environmental Effects and Genetic Basis Analysis of Grain Elemental Concentrations in Rice (Oryza sativa L.) for Improving Human Nutrition

Y Dwiningsih, J Alkahtani - 2022 - preprints.org
Rice (Oryza sativa L.) is primary dietary source for half of the global population that
comprising both essential nutrients and toxic heavy metal elements for human health. A …

Natural variations and genome-wide association studies in crop plants

X Huang, B Han - Annual review of plant biology, 2014 - annualreviews.org
Natural variants of crops are generated from wild progenitor plants under both natural and
human selection. Diverse crops that are able to adapt to various environmental conditions …

FERONIA restricts Pseudomonas in the rhizosphere microbiome via regulation of reactive oxygen species

YI Song, AJ Wilson, XC Zhang, D Thoms, R Sohrabi… - Nature plants, 2021 - nature.com
Maintaining microbiome structure is critical for the health of both plants and animals. By re-
screening a collection of Arabidopsis mutants affecting root immunity and hormone …

[HTML][HTML] Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding

RK Varshney, R Terauchi, SR McCouch - PLoS biology, 2014 - journals.plos.org
Next generation sequencing (NGS) technologies are being used to generate whole genome
sequences for a wide range of crop species. When combined with precise phenotyping …

Bulked sample analysis in genetics, genomics and crop improvement

C Zou, P Wang, Y Xu - Plant biotechnology journal, 2016 - Wiley Online Library
Biological assay has been based on analysis of all individuals collected from sample
populations. Bulked sample analysis (BSA), which works with selected and pooled …

[HTML][HTML] Brassinosteroids dominate hormonal regulation of plant thermomorphogenesis via BZR1

C Ibañez, C Delker, C Martinez, K Bürstenbinder… - Current Biology, 2018 - cell.com
Thermomorphogenesis is defined as the suite of morphological changes that together are
likely to contribute to adaptive growth acclimation to usually elevated ambient temperature …

Using next-generation sequencing to isolate mutant genes from forward genetic screens

K Schneeberger - Nature Reviews Genetics, 2014 - nature.com
The long-lasting success of forward genetic screens relies on the simple molecular basis of
the characterized phenotypes, which are typically caused by mutations in single genes …

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps

JA Tennessen, R Govindarajulu… - Genome biology and …, 2014 - academic.oup.com
Whole-genome duplications are radical evolutionary events that have driven speciation and
adaptation in many taxa. Higher-order polyploids have complex histories often including …

RNA‐S eq bulked segregant analysis enables the identification of high‐resolution genetic markers for breeding in hexaploid wheat

RH Ramirez‐Gonzalez, V Segovia… - Plant biotechnology …, 2015 - Wiley Online Library
The identification of genetic markers linked to genes of agronomic importance is a major aim
of crop research and breeding programmes. Here, we identify markers for Yr15, a major …

[HTML][HTML] The current developments in medicinal plant genomics enabled the diversification of secondary metabolites' biosynthesis

MM Alami, Z Ouyang, Y Zhang, S Shu, G Yang… - International journal of …, 2022 - mdpi.com
Medicinal plants produce important substrates for their adaptation and defenses against
environmental factors and, at the same time, are used for traditional medicine and industrial …