Quantitative susceptibility mapping using deep neural network: QSMnet

J Yoon, E Gong, I Chatnuntawech, B Bilgic, J Lee… - Neuroimage, 2018 - Elsevier
Deep neural networks have demonstrated promising potential for the field of medical image
reconstruction, successfully generating high quality images for CT, PET and MRI. In this …

Convolutional encoder–decoder networks for pixel‐wise ear detection and segmentation

Ž Emeršič, LL Gabriel, V Štruc, P Peer - IET Biometrics, 2018 - Wiley Online Library
Object detection and segmentation represents the basis for many tasks in computer and
machine vision. In biometric recognition systems the detection of the region‐of‐interest (ROI) …

A novel generic dictionary-based denoising method for improving noisy and densely packed nuclei segmentation in 3D time-lapse fluorescence microscopy images

L Nasser, T Boudier - Scientific reports, 2019 - nature.com
Time-lapse fluorescence microscopy is an essential technique for quantifying various
characteristics of cellular processes, ie cell survival, migration, and differentiation. To …

A comparative study for nuclei segmentation using latest deep learning optimizers

EN Eltayab, W Al-Atabany, NM Salem… - 2023 5th Novel …, 2023 - ieeexplore.ieee.org
Nuclei segmentation is a critical task in biological image analysis, with numerous
applications in cancer diagnosis, grading, staging, and treatment planning. However, this …

BaseFormer: Transformer based Base-Caller for Fast and Accurate Next Generation Sequencing

S Li, Z Guo, A Shen, Z Yu, W Mao… - 2022 44th Annual …, 2022 - ieeexplore.ieee.org
Gene sequencing technology is a tool which greatly impacts modern biology and medicine.
The next-generation sequencing (NGS) lies at the heart of gene sequencing for its massively …

Digging deeper: methodologies for high-content phenotyping in Caenorhabditis elegans

DS Patel, N Xu, H Lu - Lab animal, 2019 - nature.com
Deep phenotyping is an emerging conceptual paradigm and experimental approach aimed
at measuring and linking many aspects of a phenotype to understand its underlying biology …

Method for analyzing behavior of cell, and use thereof

J Kotoku, T Hirose, D Nanba, E Nishimura - US Patent 11,475,578, 2022 - Google Patents
Even for the case where cells such as human epidermal keratinocytes form a dense colony,
or the case where cell contours are indefinite, each of the cells is automatically tracked with …