Discovery of novel pyrazole and pyrazolo[1,5‐a]pyrimidine derivatives as cyclooxygenase inhibitors (COX‐1 and COX‐2) using molecular modeling simulation

R Ayman, AM Radwan, AM Elmetwally… - Archiv der …, 2023 - Wiley Online Library
Searching for effective and selective anti‐inflammatory agents, our study involved designing
and synthesizing new pyrazole and pyrazolo [1, 5‐a] pyrimidine derivatives 4–11. The …

Current Trends and Challenges in Drug-Likeness Prediction: Are They Generalizable and Interpretable?

W Zhu, Y Wang, Y Niu, L Zhang, Z Liu - Health Data Science, 2023 - spj.science.org
Importance: Drug-likeness of a compound is an overall assessment of its potential to
succeed in clinical trials, and is essential for economizing research expenditures by filtering …

DrugMetric: quantitative drug-likeness scoring based on chemical space distance

B Li, Z Wang, Z Liu, Y Tao, C Sha… - Briefings in …, 2024 - academic.oup.com
The process of drug discovery is widely known to be lengthy and resource-intensive.
Artificial Intelligence approaches bring hope for accelerating the identification of molecules …

Prediction of Small-Molecule Developability Using Large-Scale In Silico ADMET Models

M Beckers, N Sturm, F Sirockin… - Journal of medicinal …, 2023 - ACS Publications
Early in silico assessment of the potential of a series of compounds to deliver a drug is one
of the major challenges in computer-assisted drug design. The goal is to identify the right …

MolFilterGAN: a progressively augmented generative adversarial network for triaging AI-designed molecules

X Liu, W Zhang, X Tong, F Zhong, Z Li, Z Xiong… - Journal of …, 2023 - Springer
Artificial intelligence (AI)-based molecular design methods, especially deep generative
models for generating novel molecule structures, have gratified our imagination to explore …

miDruglikeness: subdivisional drug-likeness prediction models using active ensemble learning strategies

C Cai, H Lin, H Wang, Y Xu, Q Ouyang, L Lai, J Pei - Biomolecules, 2022 - mdpi.com
The drug development pipeline involves several stages including in vitro assays, in vivo
assays, and clinical trials. For candidate selection, it is important to consider that a …

[HTML][HTML] Molecular similarity: Theory, applications, and perspectives

K López-Pérez, JF Avellaneda-Tamayo, L Chen… - Artificial Intelligence …, 2024 - Elsevier
Molecular similarity pervades much of our understanding and rationalization of chemistry.
This has become particularly evident in the current data-intensive era of chemical research …

Bidirectional generation of structure and properties through a single molecular foundation model

J Chang, JC Ye - Nature Communications, 2024 - nature.com
Recent successes of foundation models in artificial intelligence have prompted the
emergence of large-scale chemical pre-trained models. Despite the growing interest in large …

Structure‐based pharmacophore modeling for precision inhibition of mutant ESR2 in breast cancer: A systematic computational approach

S Islam, MA Amin, KRR Rengasamy… - Cancer …, 2024 - Wiley Online Library
Background Breast cancer, a leading cause of female mortality, is closely linked to mutations
in estrogen receptor beta (ESR2), particularly in the ligand‐binding domain, which …

Evaluating the use of graph neural networks and transfer learning for oral bioavailability prediction

SSS Ng, Y Lu - Journal of Chemical Information and Modeling, 2023 - ACS Publications
Oral bioavailability is a pharmacokinetic property that plays an important role in drug
discovery. Recently developed computational models involve the use of molecular …