Post-translational modifications in proteins: resources, tools and prediction methods

S Ramazi, J Zahiri - Database, 2021 - academic.oup.com
Posttranslational modifications (PTMs) refer to amino acid side chain modification in some
proteins after their biosynthesis. There are more than 400 different types of PTMs affecting …

The role of ubiquitination in tumorigenesis and targeted drug discovery

L Deng, T Meng, L Chen, W Wei, P Wang - Signal transduction and …, 2020 - nature.com
Ubiquitination, an important type of protein posttranslational modification (PTM), plays a
crucial role in controlling substrate degradation and subsequently mediates the “quantity” …

Evaluation of post-translational modifications in histone proteins: A review on histone modification defects in developmental and neurological disorders

S Ramazi, A Allahverdi, J Zahiri - Journal of biosciences, 2020 - Springer
Post-translational modification (PTM) in histone proteins is a covalent modification which
mainly consists of methylation, phosphorylation, acetylation, ubiquitylation, SUMOylation …

The ubiquitin–proteasome system in immune cells

G Çetin, S Klafack, M Studencka-Turski, E Krüger… - Biomolecules, 2021 - mdpi.com
The ubiquitin–proteasome system (UPS) is the major intracellular and non-lysosomal
protein degradation system. Thanks to its unique capacity of eliminating old, damaged …

Targeting NEDD8-activating enzyme for cancer therapy: developments, clinical trials, challenges and future research directions

DJ Fu, T Wang - Journal of Hematology & Oncology, 2023 - Springer
NEDDylation, a post-translational modification through three-step enzymatic cascades,
plays crucial roles in the regulation of diverse biological processes. NEDD8-activating …

Sde proteins coordinate ubiquitin utilization and phosphoribosylation to establish and maintain the Legionella replication vacuole

KM Kotewicz, M Zhang, S Kim, MS Martin… - Nature …, 2024 - nature.com
Abstract The Legionella pneumophila Sde family of translocated proteins promotes host
tubular endoplasmic reticulum (ER) rearrangements that are tightly linked to phosphoribosyl …

Hijacking of the Host Ubiquitin Network by Legionella pneumophila

J Qiu, ZQ Luo - Frontiers in cellular and infection microbiology, 2017 - frontiersin.org
Protein ubiquitination is critical for regulation of numerous eukaryotic cellular processes
such as protein homeostasis, cell cycle progression, immune response, DNA repair, and …

Nuclear dynamics: Formation of bodies and trafficking in plant nuclei

E Muñoz-Díaz, J Sáez-Vásquez - Frontiers in Plant Science, 2022 - frontiersin.org
The existence of the nucleus distinguishes prokaryotes and eukaryotes. Apart from
containing most of the genetic material, the nucleus possesses several nuclear bodies …

Ubiquitin and its relatives as wizards of the endolysosomal system

I Berlin, A Sapmaz, V Stévenin… - Journal of Cell …, 2023 - journals.biologists.com
The endolysosomal system comprises a dynamic constellation of vesicles working together
to sense and interpret environmental cues and facilitate homeostasis. Integrating …

Electron transfer in protein modifications: from detection to imaging

L Zhang, M Chu, C Ji, W Wang, J Tan, Q Yuan - Science China Chemistry, 2023 - Springer
Signal pathways participate in vital biological processes and regulate complex life activities
through protein modifications. Protein modifications in signal pathways are accompanied by …