The epigenetic basis of cellular heterogeneity

B Carter, K Zhao - Nature Reviews Genetics, 2021 - nature.com
… Other studies have shown that variability in the expression and/or binding of specific
transcription factors is highly correlated with heterogeneity of chromatin accessibility at associated …

Ageing and sources of transcriptional heterogeneity

C Nikopoulou, S Parekh, P Tessarz - Biological chemistry, 2019 - degruyter.com
… of transcriptional noise and bursts, their influence on cellular heterogeneity and their impact
on cellular fate. We … how ageing affects transcriptional processes and cellular heterogeneity. …

[HTML][HTML] Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

Y Muto, PC Wilson, N Ledru, H Wu, H Dimke… - Nature …, 2021 - nature.com
… We used Seurat to determine the cellular composition of our snRNA-seq samples, annotate
cells based on their transcriptional profiles, and inform our snATAC-seq analysis (Fig. 1a). …

[HTML][HTML] Characterizing cellular heterogeneity in fibrotic hypersensitivity pneumonitis by single-cell transcriptional analysis

J Wang, L Zhang, L Luo, P He, A Xiong, M Jiang… - Cell Death …, 2022 - nature.com
… NK cells and KLRG1 + effector CD8 + T cells had greater activity in inflammation-promoting. …
of cellular heterogeneity in FHP, and highlight the indispensable role of cell subpopulations …

[HTML][HTML] Single-cell transcriptional profiling of human thymic stroma uncovers novel cellular heterogeneity in the thymic medulla

JL Bautista, NT Cramer, CN Miller, J Chavez… - Nature …, 2021 - nature.com
… previously appreciated, the extent of this cellular heterogeneity in the human thymus is not
well understood. Here we use single-cell RNA sequencing to comprehensively profile the …

Cellular heterogeneity and live cell arrays

MA Walling, JRE Shepard - Chemical Society Reviews, 2011 - pubs.rsc.org
transcription and translation have inherent randomness based on the variables associated
with molecular recognition and other factors that govern cellular … causes transcriptional

[HTML][HTML] The effect of heterogeneous Transcription Start Sites (TSS) on the translatome: implications for the mammalian cellular phenotype

FX Dieudonné, PBF O'Connor, P Gubler-Jaquier… - BMC genomics, 2015 - Springer
… in the transcriptional program of the cell [13, 17]. We envisage cellular TL heterogeneity within
… the cell encounters. As with the “quasi-species” defined for RNA viruses [75], this gives the …

Population robustness arising from cellular heterogeneity

P Paszek, S Ryan, L Ashall, K Sillitoe… - Proceedings of the …, 2010 - National Acad Sciences
… the 45-min IκBε transcription delay is optimal for generation of cellular variation in oscillation
… timing affects the cellular heterogeneity of NF-κB oscillations and the ability of single cells to …

Comprehensive single-cell transcriptional profiling of a multicellular organism

J Cao, JS Packer, V Ramani, DA Cusanovich, C Huynh… - Science, 2017 - science.org
cellular heterogeneity, we developed a combinatorial indexing strategy to profile the
transcriptomes of single cells or nuclei, termed sci-RNA-seq (single-cell … nearly 50,000 cells from …

[PDF][PDF] Dynamic enhancer DNA methylation as basis for transcriptional and cellular heterogeneity of ESCs

Y Song, PR van den Berg, S Markoulaki, F Soldner… - Molecular cell, 2019 - cell.com
cells and found that the allelic DNA methylation state is dynamically switching, resulting in
cell-to-cell heterogeneity… between DNA methyltransferases and transcription factor binding on …