Prediction of deleterious human alleles

S Sunyaev, V Ramensky, I Koch… - Human molecular …, 2001 - academic.oup.com
Single nucleotide polymorphisms (SNPs) constitute the bulk of human genetic variation,
occurring with an average density of∼ 1/1000 nucleotides of a genotype. SNPs are either …

Prediction of nonsynonymous single nucleotide polymorphisms in human disease-associated genes

S Sunyaev, J Hanke, A Aydin, U Wirkner… - Journal of molecular …, 1999 - Springer
Abstract Analysis of human genetic variation can shed light on the problem of the genetic
basis of complex disorders. Nonsynonymous single nucleotide polymorphisms (SNPs) …

Accounting for human polymorphisms predicted to affect protein function

PC Ng, S Henikoff - Genome research, 2002 - genome.cshlp.org
A major interest in human genetics is to determine whether a nonsynonymous single-base
nucleotide polymorphism (nsSNP) in a gene affects its protein product and, consequently …

SNPeffect v2. 0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs

J Reumers, S Maurer-Stroh, J Schymkowitz… - …, 2006 - academic.oup.com
Single nucleotide polymorphisms (SNPs) constitute the most fundamental type of genetic
variation in human populations. About 75 000 of these reported variations cause an amino …

Human non‐synonymous SNPs: server and survey

V Ramensky, P Bork, S Sunyaev - Nucleic acids research, 2002 - academic.oup.com
Human single nucleotide polymorphisms (SNPs) represent the most frequent type of human
population DNA variation. One of the main goals of SNP research is to understand the …

Predicting the effects of amino acid substitutions on protein function

PC Ng, S Henikoff - Annu. Rev. Genomics Hum. Genet., 2006 - annualreviews.org
Nonsynonymous single nucleotide polymorphisms (nsSNPs) are coding variants that
introduce amino acid changes in their corresponding proteins. Because nsSNPs can affect …

Prediction of the phenotypic effects of non-synonymous single nucleotide polymorphisms using structural and evolutionary information

L Bao, Y Cui - Bioinformatics, 2005 - academic.oup.com
Motivation: There has been great expectation that the knowledge of an individual's genotype
will provide a basis for assessing susceptibility to diseases and designing individualized …

F-SNP: computationally predicted functional SNPs for disease association studies

PH Lee, H Shatkay - Nucleic acids research, 2007 - academic.oup.com
Abstract The Functional Single Nucleotide Polymorphism (F-SNP) database integrates
information obtained from 16 bioinformatics tools and databases about the functional effects …

Identification and analysis of deleterious human SNPs

P Yue, J Moult - Journal of molecular biology, 2006 - Elsevier
We have developed two methods of identifying which non-synonomous single base
changes have a deleterious effect on protein function in vivo. One method, described …

Prediction of deleterious nonsynonymous single‐nucleotide polymorphism for human diseases

J Wu, R Jiang - The Scientific World Journal, 2013 - Wiley Online Library
The identification of genetic variants that are responsible for human inherited diseases is a
fundamental problem in human and medical genetics. As a typical type of genetic variation …