[HTML][HTML] Recurrent neural networks with specialized word embeddings for health-domain named-entity recognition

IJ Unanue, EZ Borzeshi, M Piccardi - Journal of biomedical informatics, 2017 - Elsevier
Background Previous state-of-the-art systems on Drug Name Recognition (DNR) and
Clinical Concept Extraction (CCE) have focused on a combination of text “feature …

[HTML][HTML] Combinatorial feature embedding based on CNN and LSTM for biomedical named entity recognition

M Cho, J Ha, C Park, S Park - Journal of biomedical informatics, 2020 - Elsevier
With the rapid advancement of technology and the necessity of processing large amounts of
data, biomedical Named Entity Recognition (NER) has become an essential technique for …

Biomedical named entity recognition using deep neural networks with contextual information

H Cho, H Lee - BMC bioinformatics, 2019 - Springer
Background In biomedical text mining, named entity recognition (NER) is an important task
used to extract information from biomedical articles. Previously proposed methods for NER …

[HTML][HTML] Boosting drug named entity recognition using an aggregate classifier

I Korkontzelos, D Piliouras, AW Dowsey… - Artificial intelligence in …, 2015 - Elsevier
Objective Drug named entity recognition (NER) is a critical step for complex biomedical NLP
tasks such as the extraction of pharmacogenomic, pharmacodynamic and pharmacokinetic …

[PDF][PDF] Exploring word embedding for drug name recognition

I Segura-Bedmar, V Suárez-Paniagua… - Proceedings of the …, 2015 - aclanthology.org
This paper describes a machine learningbased approach that uses word embedding
features to recognize drug names from biomedical texts. As a starting point, we developed a …

Disease named entity recognition from biomedical literature using a novel convolutional neural network

Z Zhao, Z Yang, L Luo, L Wang, Y Zhang, H Lin… - BMC medical …, 2017 - Springer
Background Automatic disease named entity recognition (DNER) is of utmost importance for
development of more sophisticated BioNLP tools. However, most conventional CRF based …

[HTML][HTML] Incorporating dictionaries into deep neural networks for the Chinese clinical named entity recognition

Q Wang, Y Zhou, T Ruan, D Gao, Y Xia, P He - Journal of biomedical …, 2019 - Elsevier
Clinical named entity recognition aims to identify and classify clinical terms such as
diseases, symptoms, treatments, exams, and body parts in electronic health records, which …

Recurrent neural network models for disease name recognition using domain invariant features

SK Sahu, A Anand - arXiv preprint arXiv:1606.09371, 2016 - arxiv.org
Hand-crafted features based on linguistic and domain-knowledge play crucial role in
determining the performance of disease name recognition systems. Such methods are …

Research of clinical named entity recognition based on Bi-LSTM-CRF

Y Qin, Y Zeng - Journal of Shanghai Jiaotong University (Science), 2018 - Springer
Abstract Electronic Medical Records (EMR) with unstructured sentences and various
conceptual expressions provide rich information for medical information extraction …

[HTML][HTML] Clinical named entity recognition using deep learning models

Y Wu, M Jiang, J Xu, D Zhi, H Xu - AMIA annual symposium …, 2017 - ncbi.nlm.nih.gov
Abstract Clinical Named Entity Recognition (NER) is a critical natural language processing
(NLP) task to extract important concepts (named entities) from clinical narratives …