Support vector machine classification and validation of cancer tissue samples using microarray expression data

TS Furey, N Cristianini, N Duffy, DW Bednarski… - …, 2000 - academic.oup.com
Motivation: DNA microarray experiments generating thousands of gene expression
measurements, are being used to gather information from tissue and cell samples regarding …

[PDF][PDF] Support vector machine classification of microarray data

S Mukherjee, P Tamayo, D Slonim, A Verri, T Golub… - 1999 - academia.edu
The Problem: Use the learning from examples paradigm to make class predictions and infer
genes involved in these predictions from DNA microarray expression data. Specifically, we …

Classifying microarray data using support vector machines

S Mukherjee - A practical approach to microarray data analysis, 2003 - Springer
Over the last few years the routine use of DNA microarrays has made possible the creation
of large data sets of molecular information characterizing complex biological systems …

Applications of support vector machines to cancer classification with microarray data

F Chu, L Wang - International journal of neural systems, 2005 - World Scientific
Microarray gene expression data usually have a large number of dimensions, eg, over ten
thousand genes, and a small number of samples, eg, a few tens of patients. In this paper, we …

Classification of gene microarrays by penalized logistic regression

J Zhu, T Hastie - Biostatistics, 2004 - academic.oup.com
Classification of patient samples is an important aspect of cancer diagnosis and treatment.
The support vector machine (SVM) has been successfully applied to microarray cancer …

[PDF][PDF] Support vector machine classification of microarray gene expression data

MPS Brown, WN Grundy, D Lin… - … of California, Santa …, 1999 - noble.gs.washington.edu
We introduce a new method of functionally classifying genes using gene expression data
from DNA microarray hybridization experiments. The method is based on the theory of …

[HTML][HTML] Are random forests better than support vector machines for microarray-based cancer classification?

A Statnikov, CF Aliferis - AMIA annual symposium proceedings, 2007 - ncbi.nlm.nih.gov
Cancer diagnosis and clinical outcome prediction are among the most important emerging
applications of gene expression microarray technology with several molecular signatures on …

A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification

A Statnikov, L Wang, CF Aliferis - BMC bioinformatics, 2008 - Springer
Background Cancer diagnosis and clinical outcome prediction are among the most
important emerging applications of gene expression microarray technology with several …

Recipe for uncovering predictive genes using support vector machines based on model population analysis

HD Li, YZ Liang, QS Xu, DS Cao… - IEEE/ACM …, 2011 - ieeexplore.ieee.org
Selecting a small number of informative genes for microarray-based tumor classification is
central to cancer prediction and treatment. Based on model population analysis, here we …

[HTML][HTML] Gene expression data analysis

A Brazma, J Vilo - FEBS letters, 2000 - Elsevier
Microarrays are one of the latest breakthroughs in experimental molecular biology, which
allow monitoring of gene expression for tens of thousands of genes in parallel and are …