Here, we show that a nucleosome obstructing transcription from the IFN-β promoter slides in vivo in response to virus infection, thus exposing the previously masked TATA box and the …
M Li, A Hada, P Sen, L Olufemi, MA Hall, BY Smith… - Elife, 2015 - elifesciences.org
The chromatin landscape and promoter architecture are dominated by the interplay of nucleosome and transcription factor (TF) binding to crucial DNA sequence elements …
A Afek, I Sela, N Musa-Lempel, DB Lukatsky - Biophysical journal, 2011 - cell.com
Quantitative understanding of the principles regulating nucleosome occupancy on a genome-wide level is a central issue in eukaryotic genomics. Here, we address this question …
J Côté, CL Peterson… - Proceedings of the …, 1998 - National Acad Sciences
To investigate the mechanism of SWI/SNF action, we have analyzed the pathway by which SWI/SNF stimulates formation of transcription factor-bound nucleosome core complexes. We …
A Flaus, T Owen-Hughes - Molecular and cellular biology, 2003 - Taylor & Francis
The fundamental subunit of chromatin, the nucleosome, is not a static entity but can move along DNA via either thermal or enzyme-driven movements. Here we have monitored the …
One hallmark of ATP-dependent remodeling complexes is the ability to make nucleosomal DNA accessible to regulatory factors. We have compared two prominent human ATP …
Transcription factors (TF) bind DNA-target sites within promoters to activate gene expression. TFs target their DNA-recognition sequences with high specificity by binding with …
C Tan, S Takada - Proceedings of the National Academy of …, 2020 - National Acad Sciences
While recent experiments revealed that some pioneer transcription factors (TFs) can bind to their target DNA sequences inside a nucleosome, the binding dynamics of their target …
GP Vicent, AS Nacht, CL Smith, CL Peterson… - Molecular Cell, 2004 - cell.com
Regulation of gene expression requires dynamic changes in chromatin, but the nature of these changes is not well understood. Here, we show that progesterone treatment of …