Simultaneous detection of multiple DNA damage types by multi-colour fluorescent labelling

D Torchinsky, Y Michaeli, NR Gassman… - Chemical …, 2019 - pubs.rsc.org
Herein we present an assay allowing concurrent detection of oxidative DNA damage and
photoproducts. We apply DNA repair enzymes specific for each lesion type to incorporate …

Lighting up individual DNA damage sites by in vitro repair synthesis

S Zirkin, S Fishman, H Sharim, Y Michaeli… - Journal of the …, 2014 - ACS Publications
DNA damage and repair are linked to fundamental biological processes such as
metabolism, disease, and aging. Single-strand lesions are the most abundant form of DNA …

Rapid quantification of oxidation and UV induced DNA damage by repair assisted damage detection-(rapid RADD)

N Gilat, D Torchinsky, S Margalit, Y Michaeli… - Analytical …, 2020 - ACS Publications
Knowing the amount and type of DNA damage is of great significance for a broad range of
clinical and research applications. However, existing methods are either lacking in their …

Targets for repair: Detecting and quantifying DNA damage with fluorescence-based methodologies

NR Gassman, NW Holton - Current opinion in biotechnology, 2019 - Elsevier
DNA damage is a natural consequence of daily life. Endogenous metabolism and
exposures to environmental, dietary, and therapeutic chemicals, create modified DNA bases …

Quantification of dye-mediated photodamage during single-molecule DNA imaging

MA Tycon, CF Dial, K Faison, W Melvin, CJ Fecko - Analytical biochemistry, 2012 - Elsevier
Single-molecule fluorescence imaging of DNA-binding proteins has enabled detailed
investigations of their interactions. However, the intercalating dyes used to visually locate …

In Vitro Fluorogenic Real‐Time Assay of the Repair of Oxidative DNA Damage

SK Edwards, T Ono, S Wang, W Jiang… - …, 2015 - Wiley Online Library
The repair of oxidative damage to DNA is essential to avoid mutations that lead to cancer.
Oxidized DNA bases, such as 8‐oxoguanine, are a main source of these mutations, and the …

Fluorescent probes of DNA repair

DL Wilson, ET Kool - ACS chemical biology, 2017 - ACS Publications
DNA repair is now understood to play a key role in a variety of disease states, most notably
cancer. Tools for studying DNA have typically relied on traditional biochemical methods …

Detection of the Excised, Damage‐containing Oligonucleotide Products of Nucleotide Excision Repair in Human Cells

J Song, MG Kemp, JH Choi - Photochemistry and photobiology, 2017 - Wiley Online Library
The human nucleotide excision repair system targets a wide variety of DNA adducts for
removal from DNA, including photoproducts induced by UV wavelengths of sunlight. A key …

Analysis of the isolated and the clustered DNA damages by single-molecule counting

Y Zhang, R Hua, C Zhang - Analytical chemistry, 2019 - ACS Publications
DNA damage seriously threats the genomic stability and is linked to mutagenesis,
carcinogenesis, and cell death. DNA damage includes the isolated damage and the …

Detecting DNA damage

J Cadet, M Weinfeld - Analytical chemistry, 1993 - ACS Publications
The purine and pyrimidine bases in DNA are critical cellular targets of UV light and various
oxidizing agents and processes, including ion-izing radiation, photoexcited dyes, antibiotics …