[HTML][HTML] Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets

Z Miao, MS Balzer, Z Ma, H Liu, J Wu… - Nature …, 2021 - nature.com
Determining the epigenetic program that generates unique cell types in the kidney is critical
for understanding cell-type heterogeneity during tissue homeostasis and injury response …

[HTML][HTML] Epigenome-wide association studies identify DNA methylation associated with kidney function

AY Chu, A Tin, P Schlosser, YA Ko, C Qiu… - Nature …, 2017 - nature.com
Chronic kidney disease (CKD) is defined by reduced estimated glomerular filtration rate
(eGFR). Previous genetic studies have implicated regulatory mechanisms contributing to …

[HTML][HTML] Beyond genetics: epigenetic code in chronic kidney disease

RS Dwivedi, JG Herman, TA McCaffrey, DSC Raj - Kidney international, 2011 - Elsevier
Epigenetics refers to a heritable change in the pattern of gene expression that is mediated
by a mechanism specifically not due to alterations in the primary nucleotide sequence. Well …

[HTML][HTML] Cytosine methylation changes in enhancer regions of core pro-fibrotic genes characterize kidney fibrosis development

YA Ko, D Mohtat, M Suzuki, ASD Park, MC Izquierdo… - Genome biology, 2013 - Springer
Background One in eleven people is affected by chronic kidney disease, a condition
characterized by kidney fibrosis and progressive loss of kidney function. Epidemiological …

[HTML][HTML] The chromatin landscape of healthy and injured cell types in the human kidney

DL Gisch, M Brennan, BB Lake, J Basta… - Nature …, 2024 - nature.com
There is a need to define regions of gene activation or repression that control human kidney
cells in states of health, injury, and repair to understand the molecular pathogenesis of …

Epigenetics and epigenomics in diabetic kidney disease and metabolic memory

M Kato, R Natarajan - Nature Reviews Nephrology, 2019 - nature.com
The development and progression of diabetic kidney disease (DKD), a highly prevalent
complication of diabetes mellitus, are influenced by both genetic and environmental factors …

[PDF][PDF] Single-cell profiling reveals sex, lineage, and regional diversity in the mouse kidney

A Ransick, NO Lindström, J Liu, Q Zhu, JJ Guo… - Developmental cell, 2019 - cell.com
Chronic kidney disease affects 10% of the population with notable differences in ethnic and
sex-related susceptibility to kidney injury and disease. Kidney dysfunction leads to …

[HTML][HTML] Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

Y Muto, PC Wilson, N Ledru, H Wu, H Dimke… - Nature …, 2021 - nature.com
The integration of single cell transcriptome and chromatin accessibility datasets enables a
deeper understanding of cell heterogeneity. We performed single nucleus ATAC (snATAC …

A single-cell transcriptome atlas of the mouse glomerulus

N Karaiskos, M Rahmatollahi… - Journal of the …, 2018 - journals.lww.com
Background Three different cell types constitute the glomerular filter: mesangial cells,
endothelial cells, and podocytes. However, to what extent cellular heterogeneity exists …

[PDF][PDF] An eQTL landscape of kidney tissue in human nephrotic syndrome

CE Gillies, R Putler, R Menon, E Otto… - The American Journal of …, 2018 - cell.com
Expression quantitative trait loci (eQTL) studies illuminate the genetics of gene expression
and, in disease research, can be particularly illuminating when using the tissues directly …